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Trav10d Gene Detail
Summary
  • Symbol
    Trav10d
  • Name
    T cell receptor alpha variable 10D
Location &
Maps
more
  • Sequence Map
    Chr14:53048454-53048953 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.10 cM
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5293417
 gene segment Chr14:53048391-53048953 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0002500
 gene segment Chr14:45655639-45656188 (+)
AKR/J MGP_AKRJ_G0002489
 gene segment Chr14:47304431-47304980 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002487
 gene segment Chr14:44974011-44974560 (+)
LP/J MGP_LPJ_G0002530
 gene segment Chr14:47515795-47516354 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002458
 gene segment Chr14:49915595-49916144 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002621
 gene segment Chr14:46635164-46635713 (+)
PWK/PhJ MGP_PWKPhJ_G0002416
 gene segment Chr14:42166152-42166711 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002362
 gene segment Chr14:43106991-43124218 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRAV13-1, T cell receptor alpha variable 13-1
  • Vertebrate Orthologs
    11
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV13-1, T cell receptor alpha variable 13-1
  • Synonyms
    TCRAV13S1, TCRAV8S1, TRAV131
  • Links
    NCBI Gene ID: 28671
    UniProt: A0A0B4J241

  • Chr Location
    14q11.2; chr14:21868839-21869365 (+)  GRCh38
  • Human Ortholog
    TRAV13-2, T cell receptor alpha variable 13-2
  • Synonyms
    TCRAV13S2, TCRAV8S2, TRAV132
  • Links
    NCBI Gene ID: 28670
    UniProt: A0A0B4J235

  • Chr Location
    14q11.2; chr14:21918188-21918756 (+)  GRCh38
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    15
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100101486 NCBI Gene Model | MGI Sequence Detail 500 C57BL/6J ±  kb
polypeptide A0A075B642 UniProt | EBI | MGI Sequence Detail 114 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
    IPR051006 T cell receptor variable domain
References
more
  • Summaries
    All 5
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory