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Ankrd40cl Gene Detail
Summary
  • Symbol
    Ankrd40cl
  • Name
    ANKRD40 C-terminal like
  • Synonyms
    Gm21885
  • Feature Type
    protein coding gene
  • IDs
    MGI:5434049
    NCBI Gene: 102639132
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:94172699-94177079 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    226 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5434049
 protein coding gene Chr11:94172665-94177086 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018952
 protein coding gene Chr11:96353063-96357089 (+)
A/J MGP_AJ_G0018920
 protein coding gene Chr11:92510256-92514439 (+)
AKR/J MGP_AKRJ_G0018890
 protein coding gene Chr11:95383959-95388142 (+)
BALB/cJ MGP_BALBcJ_G0018893
 protein coding gene Chr11:92952528-92956552 (+)
C3H/HeJ MGP_C3HHeJ_G0018707
 protein coding gene Chr11:95468145-95472328 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019345
 protein coding gene Chr11:99352084-99356124 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016976
 protein coding gene Chr11:90007304-90013465 (+)
CAST/EiJ MGP_CASTEiJ_G0018262
 protein coding gene Chr11:96173155-96177184 (+)
CBA/J MGP_CBAJ_G0018678
 protein coding gene Chr11:103477870-103482053 (+)
DBA/2J MGP_DBA2J_G0018786
 protein coding gene Chr11:92085868-92089905 (+)
FVB/NJ MGP_FVBNJ_G0018775
 protein coding gene Chr11:91504771-91508795 (+)
LP/J MGP_LPJ_G0018856
 protein coding gene Chr11:96901629-96905660 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018802
 protein coding gene Chr11:103519804-103523832 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019385
 protein coding gene Chr11:95605365-95611243 (+)
PWK/PhJ MGP_PWKPhJ_G0018032
 protein coding gene Chr11:93013444-93017756 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017822
 protein coding gene Chr11:95273727-95277733 (+)
WSB/EiJ MGP_WSBEiJ_G0018311
 protein coding gene Chr11:95486836-95490866 (+)



Homology
more
  • Human Ortholog
    ANKRD40CL, ANKRD40 C-terminal like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD40CL, ANKRD40 C-terminal like
  • Synonyms
    C17orf73, LINC00483
  • Links
    NCBI Gene ID: 55018
    UniProt: Q53H64

  • Chr Location
    17q21.33; chr17:50761029-50767557 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094091 Ensembl Gene Model | MGI Sequence Detail 4381 C57BL/6J ±  kb
transcript ENSMUST00000208510 Ensembl | MGI Sequence Detail 775 Not Applicable  
polypeptide ENSMUSP00000153501 Ensembl | MGI Sequence Detail 145 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR039195 Ankyrin repeat domain-containing protein 40
Other
Accession IDs
less
MGI:6723903
References
more
  • Summaries
    All 12
    Diseases 1
    Phenotypes 7
  • Earliest
    J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory