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Gene Expression Data
Assay Details
Assay
Reference: J:34596 Davis JA, et al., Role of Olf-1 and Pax-6 transcription factors in neurodevelopment. J Neurosci. 1996 Aug 15;16(16):5082-94
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5473601
Gene symbol: Ebf1
Gene name: early B cell factor 1
Antibody: Anti-Olf-1
Detection system: Biotinylated secondary antibody/[Strept]avidin coupled to horseradish peroxidase
Results
Specimen 1: postnatal adult (more )
Structure Level Pattern Image Note
TS28: olfactory epithelium Present Regionally restricted 1 Expression in 2 clusters of basal cell nuclei.

Specimen 2A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: telencephalon mantle layer Present 2A
TS20: telencephalon ventricular layer Absent 2A
TS20: hypothalamus Present 2A Discrete pattern of expression in the diencephalon in regions of future thalamus and hypothalamus.
TS20: thalamus Present 2A Discrete pattern of expression in the diencephalon in regions of future thalamus and hypothalamus.
TS20: medulla oblongata alar plate Present 2A
TS20: metencephalon alar plate Present 2A
TS20: metencephalon basal plate Present 2A

Specimen 2C: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: alar columns Present 2C Caudal to hindbrain, expression in dorsal (alar plate) but not ventral (basal plate) region of neural tube.
TS20: basal columns Absent 2C Caudal to hindbrain, expression in dorsal (alar plate) but not ventral (basal plate) region of neural tube.
TS20: dorsal root ganglion Present 2C
TS20: facial ganglion Present 2C
TS20: glossopharyngeal nerve Present 2C
TS20: trigeminal ganglion Present 2C
TS20: vestibulo-cochlear ganglion complex Present 2C

Specimen 2D: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: alar columns Present 2D Caudal to hindbrain, expression in dorsal (alar plate) but not ventral (basal plate) region of neural tube.
TS20: basal columns Absent 2D Caudal to hindbrain, expression in dorsal (alar plate) but not ventral (basal plate) region of neural tube.
TS20: dorsal root ganglion Present Regionally restricted 2D Expression in sensory neurons within the dorsal root ganglia.
TS20: telencephalon Present Regionally restricted 2D Expression at the margins of future olfactory bulbs.
TS20: olfactory epithelium Present 2D

Specimen 2E: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: alar columns Present 2E Caudal to hindbrain, expression in dorsal (alar plate) but not ventral (basal plate) region of neural tube.
TS20: basal columns Absent 2E Caudal to hindbrain, expression in dorsal (alar plate) but not ventral (basal plate) region of neural tube.
TS20: segmental spinal nerve Present Regionally restricted 2E Expression in the four segmental nerves of the tail.
TS20: limb pre-cartilage condensation Present 2E

Specimen 2F: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: telencephalon mantle layer Present 2F
TS20: telencephalon ventricular layer Absent 2F

Specimen 2G: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: hypothalamus Present 2G

Specimen 3A: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Strong Regionally restricted 3A Intense staining in a thin layer of cells within the cerebral cortex.
TS22: corpus striatum Present Diffuse 3A Diffuse expression in primordium of the corpus striatum.
TS22: diencephalon Present Non-Uniform 3A
TS22: hindbrain Strong 3A

Specimen 3B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Strong Regionally restricted 3B Intense staining in a thin layer of cells within the cerebral cortex.
TS22: main olfactory bulb Present 3B
TS22: diencephalon Present Non-Uniform 3B
TS22: pons Strong 3B

Specimen 3C: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: medulla oblongata Strong 3C Intense staining in rhombencephalon, including the medulla oblongata.
TS22: neural retinal epithelium Strong 3C Highest levels of expression restricted to sensory structures, particularly olfactory epithelium and neural retina,
TS22: olfactory epithelium Strong 3C Highest levels of expression restricted to sensory structures, particularly olfactory epithelium and neural retina,

Specimen 3D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: vomeronasal organ Strong 3D Highest levels of expression restricted to sensory structures, particularly vomeronasal organ.
TS22: inner ear Present 3D
TS22: vibrissa Present 3D
TS22: spinal cord Present Regionally restricted 3D Expression in dorsal spinal cord.

Specimen 3E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: spinal cord Present Regionally restricted 3E Expression in dorsal spinal cord.

Specimen 3F: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: inner ear Present 3F

Specimen 3G: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: trigeminal ganglion Present Regionally restricted 3G Expression in the majority of neurons in the trigeminal ganglion, with most intense staining at the periphery.

Specimen 4A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: spinal cord Strong Regionally restricted 4A Robust staining in cells of the dorsal neural tube. Intense expression predominantly in sensory neurons of dorsal horns. Expression in only a few cells in intermediate zone and ventral horns.
TS20: spinal cord roof plate Absent 4A

Specimen not shown E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: neural retinal epithelium Strong
TS20: spinal cord mantle layer Present Regionally restricted Expression restricted to nuclei of postmitotic cells in mantle layer of neural tube.
TS20: spinal cord ventricular layer Absent

Specimen 4B: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: spinal cord dorsal horn Strong Regionally restricted 4B Intense expression predominantly in sensory neurons of dorsal horns, restricted to the outermost zones.

Specimen 4C: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: dorsal root ganglion Present Non-Uniform 4C

Specimen 4D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: dorsal root ganglion Present Non-Uniform 4D

Specimen 4E: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: dorsal root ganglion Present Non-Uniform 4E

Specimen 5A: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: neural retinal epithelium Present Regionally restricted 5A Expression in neural retina, restricted to cells in central region of inner layer, adjacent to the optic nerve. No expression in outer layer.

Specimen 5B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Present Regionally restricted 5B Expression in a greater number of cells in inner layer, extending from central region towards peripheral margins. No expression in outer layer.
TS22: pigmented retinal epithelium Absent 5B No expression in pigmented retina or other parts of the eye.

Specimen 5C: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina nuclear layer Present Widespread 5C Expression in most or all cells of inner layer.
TS24: retina nerve fiber layer Absent 5C No expression in outer layer.

Specimen 5D: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: retina ganglion cell layer Present 5D

Specimen 5E: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: retina ganglion cell layer Present 5E
TS27: retina inner nuclear layer Present Single cells 5E Expression in a few cells in the inner nuclear layer.

Specimen 5F: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina ganglion cell layer Present Regionally restricted 5F Expression in a discrete population of cells in the ganglion cell layer.
TS28: retina inner nuclear layer Present Single cells 5F Expression in a few cells in inner half of the inner nuclear layer.

Specimen not shown adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: pigmented retinal epithelium Absent No expression in pigmented retina or other parts of the eye.

Specimen 6A: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: olfactory epithelium Present 6A
TS18: nasal pit Present Regionally restricted 6A Expression in anlage of vomeronasal gland in olfactory pit.,
TS18: nose Present Regionally restricted 6A Expression in cells in proximity to olfactory axonal projections to the presumptive olfactory bulb.

Specimen not shown E11: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: dorsal root ganglion Strong Regionally restricted Strong expression in a subset of presumptive sensory neurons in the dorsal root ganglion.
TS18: brain Weak Widespread Faint expression throughout the brain.

Specimen 6B: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: olfactory epithelium Present Widespread 6B Expression in olfactory turbinate throughout the epithelium.

Specimen 6C: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: olfactory epithelium Present Regionally restricted 6C Nuclear localization of expression.

Specimen 6D: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present Regionally restricted 6D Expression confined to lower 2/3rds of epithelium, corresponding to the neuronal cell layer.

Specimen 6E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Present Regionally restricted 6E Expression confined to lower 2/3rds of epithelium, corresponding to the neuronal cell layer.

Specimen 6F: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: olfactory epithelium Present Regionally restricted 6F Expression in cells close to the basement membrane.

Specimen 6G: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: olfactory epithelium Present Regionally restricted 6G Expression in basal cells near the basal lamina.

Specimen 8J: embryonic day 12.0 (more )
Note: Double labeled: red/purple - Ebf1 (Olf-1); blue/gray - Ncam1 (assay MGI:5473603).
Structure Level Pattern Image Note
TS20: olfactory epithelium Present Regionally restricted 8J Expression in nuclei.


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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory