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Gene Expression Data
Assay Details
Assay
Reference: J:93087 Bajanca F, et al., Integrins in the mouse myotome: developmental changes and differences between the epaxial and hypaxial lineage. Dev Dyn. 2004 Oct;231(2):402-15
Assay type: Immunohistochemistry
MGI Accession ID: MGI:5528335
Gene symbol: Itga6
Gene name: integrin alpha 6
Antibody: anti-alpha6 integrin (GoH3)
Detection system: Secondary antibody coupled to fluorescein
Assay notes: The fixative was 0.2% paraformaldehyde.
Results
Specimen 2A: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: somite Present Regionally restricted 2A Expression was detected in epithelial somites.
TS19: dermomyotome Present 2A
TS19: myotome Present 2A
TS19: tail unsegmented mesenchyme Absent 2A
TS19: paraxial mesenchyme Present Regionally restricted 2A Expression was concentrated on the basal surface of the cells forming the cleft separating the first epithelial somite from the presomitic mesoderm.

Specimen 2C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: somite Present Regionally restricted 2C Expression was present on the surface of cells in epithelial somites.

Specimen 2D: embryonic day 9.0 (more )
Note: 15 somite embryo. Double labeled: green - Itga6; red - Myf5 (assay MGI:5528358).
Structure Level Pattern Image Note
TS14: myotome Present 2D Expression was stronger in the myotome than in the dermomyotome. All Myf-5 positive cells in the myotome were also alpha-6 positive.
TS14: dermomyotome Present 2D Expression was present in the whole dermomyotome. All Myf5-positive cells in the dorsomedial lip of the dermomyotome also express alpha-6.

Specimen 2E: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Pax3 (assay MGI:5528359).
Structure Level Pattern Image Note
TS19: dermomyotome Strong 2E Expression increased in the dermomyotome compared to the 15-somite stage.

Specimen 2F: embryonic day 9.5 (more )
Note: Double labeled: green - Itga6; red - Myog (assay MGI:5528360).
Structure Level Pattern Image Note
TS15: myotome Present 2F Expression was detected on Myogenin-positive cells in the myotome.

Specimen 2K: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Myog (assay MGI:5528360).
Structure Level Pattern Image Note
TS19: trunk myotome Present 2K

Specimen 2L: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Myog (assay MGI:5528360).
Structure Level Pattern Image Note
TS19: myotome Weak Regionally restricted 2L Expression was weaker, almost absent, in rostral myotomes.

Specimen 3A: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Myod1 (assay MGI:5528398).
Structure Level Pattern Image Note
TS19: myotome Present 3A There was no overlap with MyoD-expressing cells in young epaxial cells near the dorsomedial lip.

Specimen 3B: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Myod1 (assay MGI:5528398).
Structure Level Pattern Image Note
TS19: myotome Present 3B There was no overlap with MyoD-expressing cells in rostral mature myotomes. The hypaxial domain was negative for expression.

Specimen 3C: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Myod1 (assay MGI:5528398).
Structure Level Pattern Image Note
TS19: trunk myotome Present 3C Some MyoD-positive nuclei are detected in trunk myotomes in areas containing alpha-6-positive elongated myocytes.

Specimen 3D/F: embryonic day 11.5 (more )
Note: Double labeled: green - Itga6; red - Myog (assay MGI:5528360).
Structure Level Pattern Image Note
TS19: myotome Present Regionally restricted 3D , 3F At the interlimb level of the trunk, there was strong expression in the intercalated myotome but faint expression in the ventrolateral (hypaxial) portion of the myotome compared to Myogenin staining the whole myotome.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory