Gene Expression Data
Assay Details
Assay
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Reference:
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J:316879
Negretti NM, et al., A single-cell atlas of mouse lung development. Development. 2021 Dec 15;148(24):dev199512
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:7520042
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Gene symbol:
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Col4a3
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Gene name:
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collagen, type IV, alpha 3
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Results
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Specimen
6I Col4a3 E18:
embryonic day 18.0
(more )
Note: Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
Specimen
6I Col4a3 E18:
(close )
Genetic Background:
|
C57BL/6J
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Age:
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embryonic day 18.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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optical section
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Fixation:
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Formalin
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Embedding:
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Paraffin
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Note:
|
Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS26: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
6I E18
,
6I E18 inset
|
Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
Specimen
6I Col4a3 P0:
postnatal day 0
(more )
Note: Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
Specimen
6I Col4a3 P0:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
postnatal day 0
|
Sex:
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Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS27: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
6I P0 inset
,
6I P0
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Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
Specimen
6I Col4a3 P5:
postnatal day 5
(more )
Note: Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
Specimen
6I Col4a3 P5:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
postnatal day 5
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS28: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
6I P5 inset
,
6I P5
|
Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
Specimen
S10B Col4a3 E18:
embryonic day 18.0
(more )
Note: Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
Specimen
S10B Col4a3 E18:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 18.0
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
|
Specimen
S10B Col4a3 P0:
postnatal day 0
(more )
Note: Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
Specimen
S10B Col4a3 P0:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
postnatal day 0
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS27: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
S10B P0
,
S10B P0 inset
|
Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
Specimen
S10B Col4a3 P5:
postnatal day 5
(more )
Note: Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
Specimen
S10B Col4a3 P5:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
postnatal day 5
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Hopx (assay MGI:7520021).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS28: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
S10B P5 inset
,
S10B P5
|
Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
Specimen
S10D Col4a3 E18:
embryonic day 18.0
(more )
Note: Double labeled: red - Col4a3; white - Car4 (assay MGI:7520030).
Specimen
S10D Col4a3 E18:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
embryonic day 18.0
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Car4 (assay MGI:7520030).
|
Specimen
S10D Col4a3 P0:
postnatal day 0
(more )
Note: Double labeled: red - Col4a3; white - Car4 (assay MGI:7520030).
Specimen
S10D Col4a3 P0:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
postnatal day 0
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Car4 (assay MGI:7520030).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS27: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
S10D P0
,
S10D P0 inset
|
Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
Specimen
S10D Col4a3 P5:
postnatal day 5
(more )
Note: Double labeled: red - Col4a3; white - Car4 (assay MGI:7520030).
Specimen
S10D Col4a3 P5:
(close )
Genetic Background:
|
C57BL/6J
|
Age:
|
postnatal day 5
|
Sex:
|
Not Specified
|
Type:
|
optical section
|
Fixation:
|
Formalin
|
Embedding:
|
Paraffin
|
Note:
|
Double labeled: red - Col4a3; white - Car4 (assay MGI:7520030).
|
Structure |
Cell Type |
Level |
Pattern |
Image |
Note |
TS28: lung alveolus |
pulmonary alveolar type 1 cell |
Present |
|
S10D P5 inset
,
S10D P5
|
Expression somewhat specific to alveolar type I (AT1) epithelial cells.
|
|