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F2 Gene Detail
Summary
  • Symbol
    F2
  • Name
    coagulation factor II
  • Synonyms
    Cf-2, Cf2, FII, prothrombin, thrombin
  • Feature Type
    protein coding gene
  • IDs
    MGI:88380
    NCBI Gene: 14061
  • Alliance
    gene page
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:91455665-91466759 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 50.63 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    327 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_88380
 protein coding gene Chr2:91442742-91466799 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026152
 protein coding gene Chr2:92973870-92986008 (-)
A/J MGP_AJ_G0026113
 protein coding gene Chr2:89244976-89256065 (-)
AKR/J MGP_AKRJ_G0026094
 protein coding gene Chr2:91712747-91723821 (-)
BALB/cJ MGP_BALBcJ_G0026122
 protein coding gene Chr2:89428980-89440065 (-)
C3H/HeJ MGP_C3HHeJ_G0025873
 protein coding gene Chr2:91996015-92007084 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026573
 protein coding gene Chr2:96227072-96238148 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023964
 protein coding gene Chr2:85741843-85754197 (-)
CAST/EiJ MGP_CASTEiJ_G0025338
 protein coding gene Chr2:92542160-92553013 (-)
CBA/J MGP_CBAJ_G0025851
 protein coding gene Chr2:99531746-99542812 (-)
DBA/2J MGP_DBA2J_G0025987
 protein coding gene Chr2:88847140-88858722 (-)
FVB/NJ MGP_FVBNJ_G0025950
 protein coding gene Chr2:87945660-87957322 (-)
LP/J MGP_LPJ_G0026091
 protein coding gene Chr2:93190534-93201623 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025976
 protein coding gene Chr2:102549077-102560162 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026627
 protein coding gene Chr2:91785512-91796634 (-)
PWK/PhJ MGP_PWKPhJ_G0025073
 protein coding gene Chr2:88581058-88592471 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024874
 protein coding gene Chr2:91366362-91379834 (-)
WSB/EiJ MGP_WSBEiJ_G0025405
 protein coding gene Chr2:92386978-92398118 (-)



Homology
more
  • Human Ortholog
    F2, coagulation factor II, thrombin
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    F2, coagulation factor II, thrombin
  • Synonyms
    PT, RPRGL2, THPH1
  • Links
    NCBI Gene ID: 2147
    neXtProt AC: NX_P00734
    UniProt: P00734

  • Chr Location
    11p11.2; chr11:46719196-46739506 (+)  GRCh38
Human Diseases
more
  • Diseases
    22 with human F2 associations

Human Disease Mouse Models
      
IDs
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Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    37 phenotypes from 4 alleles in 6 genetic backgrounds
    18 phenotypes from multigenic genotypes
    27 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygotes for targeted null mutations exhibit defects in yolk sac vasculature, internal bleeding, tissue necrosis, and die in mid- to late-gestation, or rarely, a few days after birth.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    77
  • GO References
    13
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    831
  • Tissues
    37
  • cDNA Data
    98
  • Literature Summary
    14
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000027249 Ensembl Gene Model | MGI Sequence Detail 11095 C57BL/6J ±  kb
    transcript ENSMUST00000028681 Ensembl | MGI Sequence Detail 1988 Not Applicable  
    polypeptide ENSMUSP00000028681 Ensembl | MGI Sequence Detail 618 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 108
      Genomic 4
      cDNA 98
      Primer pair 4
      Other 2

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-1946, MGD-MRK-1952
    References
    more
    • Summaries
      All 100
      Developmental Gene Expression 14
      Gene Ontology 13
      Phenotypes 27
    • Earliest
      J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory