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Hbp1 Gene Detail
Summary
  • Symbol
    Hbp1
  • Name
    high mobility group box transcription factor 1
  • Synonyms
    1700058O05Rik, C330012F01Rik, C86454
  • Feature Type
    protein coding gene
  • IDs
    MGI:894659
    NCBI Gene: 73389
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:31976449-32000529 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 13.73 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    553 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_894659
 protein coding gene Chr12:31976253-32000534 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019667
 protein coding gene Chr12:29910678-29936183 (-)
A/J MGP_AJ_G0019634
 protein coding gene Chr12:29055819-29080077 (-)
AKR/J MGP_AKRJ_G0019605
 protein coding gene Chr12:29979545-30004651 (-)
BALB/cJ MGP_BALBcJ_G0019611
 protein coding gene Chr12:29279349-29303574 (-)
C3H/HeJ MGP_C3HHeJ_G0019415
 protein coding gene Chr12:29855227-29879986 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020058
 protein coding gene Chr12:30838249-30866198 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017683
 protein coding gene Chr12:28343535-28370706 (-)
CAST/EiJ MGP_CASTEiJ_G0018970
 protein coding gene Chr12:24851184-24882857 (-)
CBA/J MGP_CBAJ_G0019387
 protein coding gene Chr12:31830244-31860742 (-)
DBA/2J MGP_DBA2J_G0019500
 protein coding gene Chr12:28878594-28903931 (-)
FVB/NJ MGP_FVBNJ_G0019491
 protein coding gene Chr12:28674298-28698685 (-)
LP/J MGP_LPJ_G0019570
 protein coding gene Chr12:30002446-30027764 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019526
 protein coding gene Chr12:31475938-31504417 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020098
 protein coding gene Chr12:29509756-29534085 (-)
PWK/PhJ MGP_PWKPhJ_G0018737
 protein coding gene Chr12:23620738-23646995 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018525
 protein coding gene Chr12:24094410-24121660 (-)
WSB/EiJ MGP_WSBEiJ_G0019020
 protein coding gene Chr12:29745332-29769664 (-)



Homology
more
  • Human Ortholog
    HBP1, HMG-box transcription factor 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HBP1, HMG-box transcription factor 1
  • Links
    NCBI Gene ID: 26959
    neXtProt AC: NX_O60381
    UniProt: O60381

  • Chr Location
    7q22.3; chr7:107168961-107202522 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice heterozygous for a gene trapped allele have behavioral abnormalities and show alterations in leukocyte, platelet and NK cell number, blood urea nitrogen levels, and circulating amylase and calcium levels.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    867
  • Tissues
    97
  • cDNA Data
    29
  • Literature Summary
    11
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 73389 NCBI Gene Model | MGI Sequence Detail 24081 C57BL/6J ±  kb
    transcript NM_177993 RefSeq | MGI Sequence Detail 2753 C57BL/6  
    polypeptide Q8R316 UniProt | EBI | MGI Sequence Detail 516 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 39
      cDNA 31
      Primer pair 8

      Microarray probesets 7
    Other
    Accession IDs
    less
    MGI:1920639, MGI:1924485, MGI:3034670, MGI:3034710
    References
    more
    • Summaries
      All 57
      Developmental Gene Expression 11
      Gene Ontology 9
      Phenotypes 13
    • Earliest
      J:38319 Tevosian SG, et al., HBP1: a HMG box transcriptional repressor that is targeted by the retinoblastoma family. Genes Dev. 1997 Feb 1;11(3):383-96
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/19/2024
    MGI 6.24     		The Jackson Laboratory