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Serpinb9c Gene Detail
Summary
  • Symbol
    Serpinb9c
  • Name
    serine (or cysteine) peptidase inhibitor, clade B, member 9c
  • Synonyms
    3830421J05Rik, NK9, ovalbumin, Spi11
  • Feature Type
    protein coding gene
  • IDs
    MGI:894669
    NCBI Gene: 20707
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:33333258-33343725 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 13.82 cM, cytoband A4
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    482 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_894669
 protein coding gene Chr13:33333258-33343737 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020434
 protein coding gene Chr13:31168114-31180991 (-)
A/J MGP_AJ_G0020389
 protein coding gene Chr13:30305564-30316466 (-)
AKR/J MGP_AKRJ_G0020366
 protein coding gene Chr13:30956786-30968623 (-)
BALB/cJ MGP_BALBcJ_G0020384
 protein coding gene Chr13:30387767-30401491 (-)
C3H/HeJ MGP_C3HHeJ_G0020187
 protein coding gene Chr13:30954824-30964843 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020820
 protein coding gene Chr13:32193740-32206271 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019704
 protein coding gene Chr13:30684890-30698288 (-)
CBA/J MGP_CBAJ_G0020143
 protein coding gene Chr13:33603749-33615463 (-)
DBA/2J MGP_DBA2J_G0020265
 protein coding gene Chr13:29809271-29819941 (-)
FVB/NJ MGP_FVBNJ_G0020250
 protein coding gene Chr13:29432159-29442874 (-)
LP/J MGP_LPJ_G0020342
 protein coding gene Chr13:31381809-31394571 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020276
 protein coding gene Chr13:33700873-33711934 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020861
 protein coding gene Chr13:30658614-30669192 (-)
PWK/PhJ MGP_PWKPhJ_G0019459
 protein coding gene Chr13:30025759-30027178 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019279
 protein coding gene Chr13:29532612-29542907 (-)
WSB/EiJ MGP_WSBEiJ_G0019766
 protein coding gene Chr13:30960267-30968891 (-)



Homology
more
  • Human Ortholog
    SERPINB9, serpin family B member 9
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SERPINB9, serpin family B member 9
  • Synonyms
    CAP-3, CAP3, PI-9, PI9
  • Links
    NCBI Gene ID: 5272
    neXtProt AC: NX_P50453
    UniProt: P50453

  • Chr Location
    6p25.2; chr6:2887270-2903309 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021404 Ensembl Gene Model | MGI Sequence Detail 10468 C57BL/6J ±  kb
transcript ENSMUST00000021837 Ensembl | MGI Sequence Detail 1902 Not Applicable  
polypeptide ENSMUSP00000021837 Ensembl | MGI Sequence Detail 387 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    Genomic 1
    cDNA 11

    Microarray probesets 3
Other
Accession IDs
less
MGI:1913916
References
more
  • Summaries
    All 32
    Gene Ontology 2
    Phenotypes 13
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory