About   Help   FAQ
Trgc2 Gene Detail
Summary
  • Symbol
    Trgc2
  • Name
    T cell receptor gamma, constant 2
  • Synonyms
    Gm16603, Tcrg-C2, Trgc2
  • Feature Type
    gene segment
  • IDs
    MGI:98626
    NCBI Gene: 107574
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:19489230-19491721 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 6.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    247 from dbSNP Build 142
  • Strain Annotations
    8
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_98626
 gene segment Chr13:19488819-19491721 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0002380
 gene segment Chr13:16422877-16429035 (-)
BALB/cJ MGP_BALBcJ_G0002389
 gene segment Chr13:16172494-16180522 (+)
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0002375
 gene segment Chr13:15381206-15386915 (+)
LP/J MGP_LPJ_G0002419
 gene segment Chr13:16664840-16666968 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002347
 gene segment Chr13:18122215-18126704 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002509
 gene segment Chr13:16220438-16223390 (-)
PWK/PhJ MGP_PWKPhJ_G0002288
 gene segment Chr13:15872861-15875955 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRGC1, T cell receptor gamma constant 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRGC1, T cell receptor gamma constant 1
  • Synonyms
    C1, TCRG, TCRGC1
  • Links
    NCBI Gene ID: 6966
    UniProt: A2JGV3, P0CF51

  • Chr Location
    7p14.1; chr7:38260088-38265678 (-)  GRCh38
  • Human Ortholog
    TRGC2, T cell receptor gamma constant 2
  • Synonyms
    TCRGC2, TRGC2(2X), TRGC2(3X)
  • Links
    NCBI Gene ID: 6967
    UniProt: P03986

  • Chr Location
    7p14.1; chr7:38239580-38249572 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    15
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 107574 NCBI Gene Model | MGI Sequence Detail 2492 C57BL/6J ±  kb
polypeptide A0A075B5Z2 UniProt | EBI | MGI Sequence Detail 167 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR051117 T cell receptor gamma variable/constant region
Molecular
Reagents
less
  • All nucleic 8
    Genomic 2
    cDNA 6
Other
Accession IDs
less
MGD-MRK-14918, MGI:4439527, MGI:6331304
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Gene Ontology 2
  • Earliest
    J:7709 Hayday AC, et al., Structure, organization, and somatic rearrangement of T cell gamma genes. Cell. 1985 Feb;40(2):259-69
  • Latest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory