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Zfa-ps Pseudogene Detail
Summary
  • Symbol
    Zfa-ps
  • Name
    zinc finger protein, autosomal, pseudogene
  • Synonyms
    Zfa
  • Feature Type
    pseudogene
  • IDs
    MGI:99153
    NCBI Gene: 22639
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr10:52419104-52421334 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 26.71 cM, cytoband B3-B4
  • Mapping Data
    15 experiments
Strain
Comparison
more
  • SNPs within 2kb
    151 from dbSNP Build 142
  • Strain Annotations
    8
  • RFLP
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99153
 pseudogene Chr10:52418416-52421835 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039769
 pseudogene ChrX:90464667-90485840 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0039576
 pseudogene Chr10:51153325-51160600 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0036924
 pseudogene ChrX:88718772-88738594 (-)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0039404
 pseudogene Chr10:48935184-48943023 (-)
LP/J MGP_LPJ_G0035805
 pseudogene ChrX:91252000-91272312 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0040282
 pseudogene Chr10:51066447-51070409 (-)
PWK/PhJ MGP_PWKPhJ_G0038194
 pseudogene ChrX:73285336-73305693 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    ZFX, zinc finger protein X-linked
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZFX, zinc finger protein X-linked
  • Synonyms
    MRXS37, ZNF926
  • Links
    NCBI Gene ID: 7543
    neXtProt AC: NX_P17010
    UniProt: P17010

  • Chr Location
    Xp22.11; chrX:24148982-24216255 (+)  GRCh38
  • Human Ortholog
    ZFY, zinc finger protein Y-linked
  • Synonyms
    ZNF911
  • Links
    NCBI Gene ID: 7544
    neXtProt AC: NX_P08048
    UniProt: P08048

  • Chr Location
    Yp11.2; chrY:2935281-2982506 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human ZFX associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 3 genetic backgrounds
    8 phenotype references
Male homozygous null were fertile and showed no spermatogenic or testicular defects.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    15
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    772
  • Tissues
    19
  • cDNA Data
    6
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049576 Ensembl Gene Model | MGI Sequence Detail 2231 C57BL/6J ±  kb
transcript ENSMUST00000180526 Ensembl | MGI Sequence Detail 2231 Not Applicable  
polypeptide P23607 UniProt | EBI | MGI Sequence Detail 742 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    Genomic 3
    cDNA 8
    Primer pair 2
    Other 4

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-15851
References
more
  • Summaries
    All 45
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 8
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory