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Otp Gene Detail
Summary
  • Symbol
    Otp
  • Name
    orthopedia homeobox
  • Feature Type
    protein coding gene
  • IDs
    MGI:99835
    NCBI Gene: 18420
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:95012144-95021633 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 49.22 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    207 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_99835
 protein coding gene Chr13:95012110-95021638 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020835
 protein coding gene Chr13:96314003-96324264 (+)
A/J MGP_AJ_G0020789
 protein coding gene Chr13:92704980-92714499 (+)
AKR/J MGP_AKRJ_G0020763
 protein coding gene Chr13:95539674-95549200 (+)
BALB/cJ MGP_BALBcJ_G0020786
 protein coding gene Chr13:93383083-93392569 (+)
C3H/HeJ MGP_C3HHeJ_G0020579
 protein coding gene Chr13:95239918-95249296 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021222
 protein coding gene Chr13:99241121-99251740 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018791
 protein coding gene Chr13:88535099-88544599 (+)
CAST/EiJ MGP_CASTEiJ_G0020098
 protein coding gene Chr13:94508020-94518521 (+)
CBA/J MGP_CBAJ_G0020538
 protein coding gene Chr13:103182009-103192744 (+)
DBA/2J MGP_DBA2J_G0020663
 protein coding gene Chr13:92492600-92502153 (+)
FVB/NJ MGP_FVBNJ_G0020644
 protein coding gene Chr13:91277058-91286503 (+)
LP/J MGP_LPJ_G0020738
 protein coding gene Chr13:96418941-96428301 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020672
 protein coding gene Chr13:103633991-103647978 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021262
 protein coding gene Chr13:94936784-94946325 (+)
PWK/PhJ MGP_PWKPhJ_G0019850
 protein coding gene Chr13:91218563-91228324 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019674
 protein coding gene Chr13:91194771-91205663 (+)
WSB/EiJ MGP_WSBEiJ_G0020155
 protein coding gene Chr13:95421041-95431289 (+)



Homology
more
  • Human Ortholog
    OTP, orthopedia homeobox
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OTP, orthopedia homeobox
  • Links
    NCBI Gene ID: 23440
    neXtProt AC: NX_Q5XKR4
    UniProt: Q5XKR4

  • Chr Location
    5q14.1; chr5:77628712-77638713 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    30 phenotypes from 4 alleles in 6 genetic backgrounds
    19 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous mutation of this gene results in impaired development of neuroendocrine cell lineages in the hypothalamus and of diencephalic dopaminergic neurons. Mice homozygous for a certain point mutation die around birth. Heterozygosity causes obesity with increased lean and body fat mass, hyperlipidemia, hyperinsulinemia, insulin resistance and impaired glucose tolerance.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1056
  • Tissues
    278
  • cDNA Data
    12
  • Literature Summary
    54
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 18420 NCBI Gene Model | MGI Sequence Detail 9490 C57BL/6J ±  kb
    transcript NM_011021 RefSeq | MGI Sequence Detail 2617 ZRU/MplStud  
    polypeptide O09113 UniProt | EBI | MGI Sequence Detail 325 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 22
      Genomic 1
      cDNA 15
      Primer pair 1
      Other 5

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-16625
    References
    more
    • Summaries
      All 88
      Developmental Gene Expression 54
      Gene Ontology 5
      Phenotypes 19
    • Earliest
      J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory