Cbm1^DBA/2J
QTL Variant Detail

Summary

• QTL variant: Cbm1^DBA/2J
• Name: cerebellum weight 1; DBA/2J
• MGI ID: MGI:2153928
• QTL: Cbm1 Location: Chr1:174456299-174456436 bp Genetic Position: Chr1, cM position of peak correlated region/allele: 81.08 cM
• QTL Note: genome coordinates based on the marker associated with the peak LOD score

Variant origin

• Strain of Specimen: DBA/2J

Variant description

• Allele Type: QTL
• Inheritance: Dominant

Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:70179

A (C57BL/6J x DBA/2J)F2 intercross and 35 BXD (C57BL/6J x DBA/2J) RI strains were used to identify QTLs associated with cerebellar weight and volume. C57BL/6J animals show increased cerebellar weight and volume compared to DBA/2J animals. F1 animals resemble C57BL/6J in cerebellar weight and volume phenotype, and the authors state that there is no significant difference between F1 and F2 animals with regard to cerebellar weight and volume. Total cerebellar size did not appear to vary significantly by age, sex, or body weight of the animals. Two QTLs linked to cerebellar weight and volume, Cbm1 (LRS = 15) and Cbm2 (LRS = 22.5), were mapped to Chromosome 1 (89 cM - 102 cM) and 8 (44 cM - 53 cM), respectively, in both the F2 cross and RI strains. Cbm1 on Chromosome 1 is associated with D1Mit150.Cbm2 on Chromosome 8 is also putatively linked to cerebellar fissure number (LRS = 8.3) at D8Mit312. Animals with DBA/2J alleles have on average one more fissure than animals with C57BL/6J alleles. Three QTLs linkedto cerebellar weight, Cbm3 (LRS = 22), Cbm4 (LRS = 30), and Cbm5 (LRS not given), mapped to Chromosome 14 (5 cM - 16 cM) and 19 (28 cM - 56 cM for Cbm4; 4 cM - 21 cM for Cbm5), respectively, in the F2 cross. All 5 QTLs mapped in this experiment do not appear to act epistatically.

References

• Original: J:70179 Airey DC, et al., Genetic control of the mouse cerebellum: identification of quantitative trait loci modulating size and architecture. J Neurosci. 2001 Jul 15;21(14):5099-109
• All: 1 reference(s)