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Bis4A/J
QTL Variant Detail
Summary
QTL variant: Bis4A/J
Name: beta-carboline induced seizures 4; A/J
MGI ID: MGI:2156751
QTL: Bis4  Location: unknown  Genetic Position: Chr7, cM position of peak correlated region/allele: 19.37 cM
QTL Note: genome coordinates based on the marker associated with the peak LOD score
Variant
origin
Strain of Specimen:  A/J
Variant
description
Allele Type:    QTL
Mutation:    Undefined
    This allele increases susceptibility to beta-CCM induced myoclonic seizures compared to C57BL/6J. (J:54925)
Inheritance:    Not Specified
Phenotypes
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View phenotypes and curated references for all genotypes (concatenated display).
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:54925

The authors examined the gentic basis of differences in seizure behaviour using a GABAa receptor agoinst beta CCM (methyl beta-carboline-3 carboxylate). A/J mice are more susceptible to beta-CCM induced myoclonic seizures than C57BL/6J mice in both latency to seizure and proportion of tested mice that seized. A genome wide screen in an F2 population of these parental strains identified a locus on proximal Chromosome 7, near D7Mit308, that displayed an association with seizure susceptibility (chi square =14.8; p = 0.006; n = 267) and seizure latency. This locus was named Bis4 with a LOD score = 3.71 and explaining ~ 22% of the genetic variance and 5-7% of the phenotypic variance for this trait. The best-fitting logistic regression model suggests that the A/J allele and the D7Mit308 locus increases the likelihood of seizures at ~3.3 fold. Candidate genes in this region include Atp1a3, Atp1b3-rs2, Grik5, Scn1b, Gabra5, Gabrb3, Gabrg3 and Szf1.

References
Original:  J:54925 Gershenfeld HK, et al., Mapping quantitative trait loci for seizure response to a GABAA receptor inverse agonist in mice. J Neurosci. 1999 May 15;19(10):3731-8
All:  1 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/05/2024
MGI 6.24
The Jackson Laboratory