El6^DDY/Jcl
QTL Variant Detail

Summary

• QTL variant: El6^DDY/Jcl
• Name: epilepsy 6; DDY/Jcl
• MGI ID: MGI:2157541
• QTL: El6 Location: Chr11:110229183-110229291 bp Genetic Position: Chr11, cM position of peak correlated region/allele: 73.57 cM
• QTL Note: genome coordinates based on the marker associated with the peak LOD score

Variant origin

• Strain of Specimen: DDY/Jcl

Variant description

• Allele Type: QTL
• Mutation: Undefined
• This allele confers seizure susceptibility compared to EL/Suz. (J:30433)
• Inheritance: Other (see notes)

Notes

This allele is consistent with additive or recessive inheritance.

Mapping and Phenotype information for this QTL, its variants and associated markers

J:30433

(ABP/LeJ x EL/Suz)F2 and (EL/Suz x DDY/Jcl)F2 intercross populations and a (EL/Suz x DDY/Jcl)F1 x DDY/Jcl backcross population were used to map QTLs associated with seizure susceptibility. Parental strain EL/Suz is susceptible to spontaneous epileptic seizures whereas parental strains ABP/LeJ and DDY/Jcl are resistant. Seizure susceptibility appears to follow partial dominant inheritance since F1 hybrids exhibit seizure frequencies similar to EL/Suz parentals. Seizure susceptibility loci El3, El4, El5, and El6 were mapped.

El3 mapped to mouse Chromosome 10 in the (ABP/LeJ x EL/Suz)F2 intercross with a maximum LOD score of 3.8 at 44 cM in linkage to D10Mit42 (P<0.0001). EL/Suz-derived alleles confer dominant seizure susceptibility at El3.

El4 mapped to mouse Chromosome 9 in the (ABP/LeJ x EL/Suz)F2 intercross with a maximum LOD score of 3.4 at 29 cM in linkage to D9Mit4 (P<0.009) and Bmp5 (P<0.005).

7.13.2015 Curator Note: Because two different crosses were used here to map El4 we consider each to be a separate mapping study. We have assigned offical nomenclature to the suggestive QTL identified in the (EL/Suz x DDY/Jcl)F1 x DDY/Jcl backcross, labeling it El8, since it is interative with El5 in the (EL/Suz x DDY/Jcl)F2 intercross.

El8 showed suggestive linkage at D9Mit10 (P<0.007) in the (EL/Suz x DDY/Jcl)F1 x DDY/Jcl backcross with a LOD score of 2. EL/Suz-derived alleles confer seizure susceptibility in an additive or recessive fashion at El8. Epistatic interaction involving El8 and El5 was detected in the (EL/Suz x DDY/Jcl)F2 intercross.

El5 mapped to mouse Chromosome 14 in the(EL/Suz x DDY/Jcl)F2 intercross with a maximum LOD score of 6.7 at 54.7 cM in linkage to D14Mit123. EL/Suz-derived alleles confer seizure susceptibility in an additive or dominant fashion at El5. Possible candidate genes inthe region of El5 are the neurofilament gene, Nfl, and seratonin receptor, Htr2a.

El6 mapped to mouse Chromosome 11 in the (EL/Suz x DDY/Jcl)F2 intercross and the (EL/Suz x DDY/Jcl)F1 x DDY/Jcl backcross with a maximum LOD score of 3.9 at 68 cM in linkage to D11Mit100. DDY/Jcl-derivedalleles confer seizure susceptibility in a recessive or additive fashion at El6.

References

• Original: J:30433 Frankel WN, et al., New seizure frequency QTL and the complex genetics of epilepsy in EL mice. Mamm Genome. 1995 Dec;6(12):830-8
• All: 1 reference(s)