Summary |
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Variant origin |
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Variant description |
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Phenotypes |
View phenotypes and curated references for all genotypes (concatenated display).
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Expression |
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Notes |
Ath9 exhibits additive inheritance.
Mapping and Phenotype information for this QTL, its variants and associated markersJ:76127Two independent strain intercosses that carry atherosclerosis phenotype-sensitizing Apoe deficiency were performed to reveal artherosclerosis susceptibility loci that are distinct from loci linked to lipoprotein levels. Animals from a C57BL/6J-derived background are susceptible to atherosclerosis and yield several-fold higher aortic lesion scores compared to animals from an FVB/NCr-derived background.In the first cross, referred to as cross 1, B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres F1 mice were crossed and the F1 offspring were intercrossed to create 197 (B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres) F2 mice for the QTL analysis. Interval mapping was done with 194 markers at a distance of no more than 10cM. In the second, confirmatory cross, B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres F1 mice were crossed and the F1 offspring were intercrossed to create 186 (B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres)F2 mice for QTL analysis. This cross was referred to as cross 2; these mice were genotyped using 127 markers at no more than 10cM intervals.Interval mapping of chromosome 1, in cross 1, revealed a peak at D1Mit359, this QTL was associated with total cholesterol, HDL and LDL with LOD scores exceeding 3.5 in the combined gender groups. A peak LOD score of 6.0 was also detected at D1Mit359 for HDL in male specific data. This QTL was named Ath9. A possible candidate gene for Ath9 is Apoa2 Unexpectedly, cross 2 also revealed a suggestive linkage (LOD 3.3) for lesion formation atD1Mit359 where cross 1 did not.The interval from 60-90 cM on mouse chromosome 1 is homologous to human 1q21-32. |
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References |
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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