About   Help   FAQ
Ath11FVB/NCr
QTL Variant Detail
Summary
QTL variant: Ath11FVB/NCr
Name: atherosclerosis 11; FVB/NCr
MGI ID: MGI:2386544
QTL: Ath11  Location: Chr10:6151945-58693521 bp  Genetic Position: Chr10, Syntenic
Variant
origin
Strain of Specimen:  FVB/NCr
Variant
description
Allele Type:    QTL
Mutation:    Undefined
    This allele confers increased aortic lesion size compared to C57BL/6J. (J:76127)
Inheritance:    Other (see notes)
Phenotypes
Loading...
View phenotypes and curated references for all genotypes (concatenated display).
Expression
In Structures Affected by this Mutation: 1 anatomical structure(s)
Notes
Ath11 fits either a dominant or additive mode of inheritance.

Candidate Genes

J:86703

Tnfaip3 was identified and investigated as a candidate gene for the QTL Ath11 on mouse Chromosome 10. No differences in Tnfaip3 expression level was found between parental strains FVB/N and C57BL/6J. However, sequence analysis revealed a Glu627Ala amino acid substitution between C57BL/6J and FVB/N, respectively. This functional polymorphism is thought to result in increased Nfkb inhibition in FVB/N compared to C57BL/6J.

Mapping and Phenotype information for this QTL, its variants and associated markers

J:76127

Two independent strain intercosses that carry atherosclerosis phenotype-sensitizing Apoe deficiency were performed to reveal artherosclerosis susceptibility loci that are distinct from loci linked to lipoprotein levels.

Animals from a C57BL/6J-derived background are susceptible to atherosclerosis and yield several-fold higher aortic lesion scores compared to animals from an FVB/NCr-derived background.

In the first cross, referred to as cross 1, B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres F1 mice were crossed and the F1 offspring were intercrossed to create 197 (B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres) F2 mice for the QTL analysis. Interval mapping was done with 194 markers at a distance of no more than 10cM.

In the second, confirmatory cross, B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres F1 mice were crossed and the F1 offspring were intercrossed to create 186 (B6.129P2-Apoetm1Unc x FVB.129P2-Apoetm1Bres)F2 mice for QTL analysis. This cross was referred to as cross 2; these mice were genotyped using 127 markers at no more than 10cM intervals.

A highly significant locus on chromosome 10 was identified in both crosses with a LOD score of 7.8 at D10Mit213 in cross 1 and 11.9 at D10Mit214 in cross 2. The locus accounted for 19% of log lesion variance in cross 1 and 25% in cross 2. Interval mapping of chromosome 10 in cross 1 revealed a peak that included both D10Mit13 and D10Mit14. The locus was labeled Ath11.

Highly significant LOD scores were obtained using either a dominant or additive model.

Unexpectedly, in cross one, homozygosity for FVB/NCr-derived alleles conferred increased lesion size when compared to mice heterozygous or homozygous for the C57BL/J allele.

The strongest candidate gene for Ath11 is Ifngr, which is located at 15cM on mouse chromosome 10. Ath11 maps to an interval (0-19cM) that is evolutionarily conserved with human chromosome 6q22-24.

References
Original:  J:76127 Dansky HM, et al., A phenotype-sensitizing apoe-deficient genetic background reveals novel atherosclerosis predisposition Loci in the mouse. Genetics. 2002 Apr;160(4):1599-608
All:  3 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
11/12/2024
MGI 6.24
The Jackson Laboratory