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Pgct1C57BL/6J
QTL Variant Detail
Summary
QTL variant: Pgct1C57BL/6J
Name: primordial germ cell tumor locus 1; C57BL/6J
MGI ID: MGI:2389316
QTL: Pgct1  Location: Chr13:70820783-70820897 bp  Genetic Position: Chr13, cM position of peak correlated region/allele: 35.97 cM
QTL Note: genome coordinates based on the marker associated with the peak LOD score
Variant
origin
Strain of Specimen:  C57BL/6J
Variant
description
Allele Type:    QTL
Mutation:    Undefined
    This allele confers resistance to germ cell tumors of the testes compared to 129S1/SvImJ.
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:63413

In crosses involving 129S3/SvImJ and C57BL/6J inbred mice a locus on mouse Chromosome 13 in the 129S3/SvImJ strain was found to be associated with male germ cell tumors of the testes. This locus designated as Pgct1 segregated significantly (-log(p) = 7.82) with D13Mit188. In adddition, regions within mouse Chromosomes 6, 9, and 12 also showed an association with the phenotype, however further linkage analysis indicated that these regions were not significant.

References
Original:  J:63413 Muller AJ, et al., A male germ cell tumor-susceptibility-determining locus, pgct1, identified on murine chromosome 13. Proc Natl Acad Sci U S A. 2000 Jul 18;97(15):8421-6
All:  1 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory