Smarca5^tm1Ais
Targeted Allele Detail

Summary

• Symbol: Smarca5^tm1Ais
• Name: SNF2 related chromatin remodeling ATPase 5; targeted mutation 1, Art I Skoultchi
• MGI ID: MGI:2683154
• Synonyms: Snf2h^-
• Gene: Smarca5 Location: Chr8:81426572-81466088 bp, - strand Genetic Position: Chr8, 38.41 cM
• Alliance: Smarca5^tm1Ais page

Mutation origin

• Germline Transmission: Earliest citation of germline transmission: J:86695
• Parent Cell Line: WW6 (ES Cell)
• Strain of Origin: STOCK 129/Sv and C57BL/6J and SJL

Mutation description

• Allele Type: Targeted (Null/knockout)
• Mutations: Insertion, Intragenic deletion
• Mutation details: A genomic fragment encompassing exons 5 through 9a was replaced with a floxed neo cassette inserted by homologous recombination. The deleted region encoded the catalytic ATPase domain (DEXDc). Protien was undetected in homozygous mutant ES cells by Western blot analysis of nuclear and cytoplasmic extracts. RT-PCR analysis of mutant ES cells corraborated these findings at the RNA level. (J:86695)

Expression

In Mice Carrying this Mutation:	2 RNA-Seq or microarray experiment(s)
In Structures Affected by this Mutation:	3 anatomical structure(s)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Smarca5 Mutation: 50 strains or lines available

References

• Original: J:86695 Stopka T, et al., The ISWI ATPase Snf2h is required for early mouse development. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14097-102
• All: 4 reference(s)