Tshp9^SM/J
QTL Variant Detail

Summary

• QTL variant: Tshp9^SM/J
• Name: tooth shape 9; SM/J
• MGI ID: MGI:3033614
• QTL: Tshp9 Location: Chr11:8976225-8976374 bp Genetic Position: Chr11, cM position of peak correlated region/allele: 5.78 cM
• QTL Note: genome coordinates based on the marker associated with the peak LOD score

Variant origin

• Strain of Specimen: SM/J

Variant description

• Allele Type: QTL

Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:76126

76 polymorphic microsatellite markers at an average distance of 27.5 cM were screened in 535 (SM/J x LG/J)F2 animals to identify QTLs associated with tooth development. Parental inbred strain LG/J exhibits larger body size compared to SM/J. Tshp9 and Tshp10, QTLs influencing tooth shape, mapped to mouse Chromosome 11. The Tshp9 interval is centered around 1.5 cM at D11Mit62 and the Tshp10 interval spans 28 cM - 40 cM on chromosome 11 near D11Mit15. Tshp9 and Tshp10 exceed the P<0.001 significance threshold of LOD=4.185.

References

• Original: J:76126 Workman MS, et al., Analysis of quantitative trait locus effects on the size and shape of mandibular molars in mice. Genetics. 2002 Apr;160(4):1573-86
• All: 1 reference(s)