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Cplaq13DBA/2J
QTL Variant Detail
Summary
QTL variant: Cplaq13DBA/2J
Name: circadian period of locomotor activity 13; DBA/2J
MGI ID: MGI:3053946
QTL: Cplaq13  Location: Chr1:172831765-181400659 bp  Genetic Position: Chr1, Syntenic
Variant
origin
Strain of Specimen:  DBA/2J
Variant
description
Allele Type:    QTL
Mutation:    Undefined
    This allele confers decreased circadian locomotor activity compared to C57BL/6J. (J:58134)
Inheritance:    Not Specified
Phenotypes
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View phenotypes and curated references for all genotypes (concatenated display).
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:58134

The B6.D2-Mtv7a/J congenic line was used to verify Cplaq3. This congenic carries DBA/2J-derived DNA at the Mtv7 locus (between 89 cM and 106 cM) on a C57BL/6J genetic background. The congenic region includes Cplaq3 (94.2 cM) and contains DBA/2J-derivedDNA from D1Mit206 to D1Mit273. Parental strain C57BL/6J exhibits greater locomotor activity during the circadian period (longer tauDBX) compared to parental strain DBA/2J (shorter tauDBX). The B6.D2-Mtv7a/J congenic exhibits decreased circadian locomotor activity compared to the background strain C57BL/6J thus confirming the decreasing effect of DBA/2J-derived alleles.

03.11.2015 Curator Note: Because Cplaq3 was originally mapped in J:36675 in 1995 uisng 13 CXB (BALB/cBy x C57BL/6By) recombinant inbred strains, which differ from the congenic mice used here, we consider the currant study a separate mapping experiment and have named the QTL identified Cplaq13.

Candidate genes found near Cplaq3 are Nhlh1, Kcnj10, Pou2f1, Ddr2, Lmx1a, Vangl2, Atp1b1, Mop3, and Rxrg.

References
Original:  J:58134 Mayeda AR, et al., A QTL for the genetic variance in free-running period and level of locomotor activity between inbred strains of mice. Behav Genet. 1999 May;29(3):171-6
All:  1 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory