Stag1^{Gt(P099A04)Wrst}
Gene trapped Allele Detail

Summary

• Symbol: Stag1^{Gt(P099A04)Wrst}
• Name: STAG1 cohesin complex component; gene trap P099A04, German Gene Trap Consortium
• MGI ID: MGI:3874033
• Gene: Stag1 Location: Chr9:100479762-100840597 bp, + strand Genetic Position: Chr9, 52.77 cM, cytoband F1
• Alliance: Stag1^{Gt(P099A04)Wrst} page

Mutation origin

• Mutant Cell Line: P099A04
• Germline Transmission: Earliest citation of germline transmission: J:184720
• Parent Cell Line: TBV2 (ES Cell)
• Strain of Origin: 129S2/SvPas

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: rFlpROSAbetageo
• Mutation details: A rFlpROSA-geo cassette containing a splicing acceptor site and a polyadenylation sequence inserted between exons 3 and 4 of the gene. The insertion creates a null allele with no detectable transcript or protein expressed from this allele, and embryos carrying this allele turn blue upon incubation in X-gal.
• Sequence Tags: Sequence tag details (2 tags)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  3SP099A04	ER911455 ; (MGI Seq Detail)	3'Splinkerette PCR	Chr9:100619484-100619625 bp (+)
  P099A04	DU822223 ; (MGI Seq Detail)	5' RACE	Chr9:100587211-100594585 bp (+)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  55 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Mice Carrying this Mutation:	60 assay results 1 RNA-Seq or microarray experiment(s)
In Structures Affected by this Mutation:	8 anatomical structure(s)

Tumor Data

List all tumor models in MMHCdb carrying Stag1^{Gt(P099A04)Wrst}

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Stag1 Mutation: 105 strains or lines available

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 5 reference(s)