Slc25a40^{Gt(IST10006D1)Tigm}
Gene trapped Allele Detail

Summary

• Symbol: Slc25a40^{Gt(IST10006D1)Tigm}
• Name: solute carrier family 25, member 40; gene trap IST10006D1, Texas A&M Institute for Genomic Medicine
• MGI ID: MGI:3929126
• Gene: Slc25a40 Location: Chr5:8472850-8504797 bp, + strand Genetic Position: Chr5, 3.43 cM
• Alliance: Slc25a40^{Gt(IST10006D1)Tigm} page

Mutation origin

• Mutant Cell Line: IST10006D1
• Germline Transmission: Earliest citation of germline transmission: J:142754
• Parent Cell Line: Lex3.13 (ES Cell)
• Strain of Origin: C57BL/6N

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: VICTR76 Vector Type: gene trap
• Mutation details: Trapped gene association determined by genome coordinate overlap and strand. The gene trap vector containing a beta-geo cassette was inserted into intron 2. The absence of transcript expression was confirmed by RT-PCR on kidney and spleen extracts. (J:142754)
• Sequence Tags: Sequence tag details (2 tags)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  IST10006D1HMF1	EF717954 ; (MGI Seq Detail)	inverse PCR	Chr5:8474798-8475235 bp (-)
  IST10006D1BBF1	EF717953 ; (MGI Seq Detail)	inverse PCR	Chr5:8475075-8475235 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  75 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 1 strain available Cell Lines: 1 line available
• Carrying any Slc25a40 Mutation: 105 strains or lines available

References

• Original: J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
• All: 2 reference(s)