Tnrc6c^{Gt(IST11346C2)Tigm}
Gene trapped Allele Detail

Summary

• Symbol: Tnrc6c^{Gt(IST11346C2)Tigm}
• Name: trinucleotide repeat containing 6C; gene trap IST11346C2, Texas A&M Institute for Genomic Medicine
• MGI ID: MGI:4001992
• Gene: Tnrc6c Location: Chr11:117545115-117654265 bp, + strand Genetic Position: Chr11, 82.96 cM
• Alliance: Tnrc6c^{Gt(IST11346C2)Tigm} page

Mutation origin

• Mutant Cell Line: IST11346C2
• Germline Transmission: Earliest citation of germline transmission: J:248980
• Parent Cell Line: Lex3.13 (ES Cell)
• Strain of Origin: C57BL/6N

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: VICTR76 Vector Type: gene trap
• Trapped gene association determined by genome coordinate overlap and strand.
• Sequence Tags: Sequence tag details (3 tags)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  IST11346C2HMR1	JM186896 ; (MGI Seq Detail)	inverse PCR	Chr11:117579074-117579564 bp (+)
  IST11346C2HMF1	EF817164 ; (MGI Seq Detail)	inverse PCR	Chr11:117578708-117579046 bp (-)
  IST11346C2BBF1	EF823451 ; (MGI Seq Detail)	inverse PCR	Chr11:117578502-117579046 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  67 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Mice Carrying this Mutation:

51 assay results

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 1 strain available Cell Lines: 1 line available
• Carrying any Tnrc6c Mutation: 148 strains or lines available

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 2 reference(s)