C2cd5^{Gt(IST12020E4)Tigm}
Gene trapped Allele Detail

Summary

• Symbol: C2cd5^{Gt(IST12020E4)Tigm}
• Name: C2 calcium-dependent domain containing 5; gene trap IST12020E4, Texas A&M Institute for Genomic Medicine
• MGI ID: MGI:4044687
• Synonyms: CDP138^-
• Gene: C2cd5 Location: Chr6:142956646-143045867 bp, - strand Genetic Position: Chr6, 75.13 cM, cytoband G2
• Alliance: C2cd5^{Gt(IST12020E4)Tigm} page

Mutation origin

• Mutant Cell Line: IST12020E4
• Germline Transmission: Earliest citation of germline transmission: J:284780
• Parent Cell Line: Lex3.13 (ES Cell)
• Strain of Origin: C57BL/6N

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: VICTR76 Vector Type: gene trap
• Mutation details: Trapped gene association determined by genome coordinate overlap and strand. The gene trap construct inserted between the ATG codon and exon 1 of the gene. PCR and immunoblot analysis confirmed the presence of the gene trap insertion and depletion of encoded protein in homozygous mutant mice. (J:284780)
• Sequence Tags: Sequence tag details (2 tags)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  IST12020E4HMF1	EF875620 ; (MGI Seq Detail)	inverse PCR	Chr6:143043826-143044410 bp (+)
  IST12020E4BBF1	EF879423 ; (MGI Seq Detail)	inverse PCR	Chr6:143043826-143044398 bp (+)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  23 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Structures Affected by this Mutation:

5 anatomical structure(s)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any C2cd5 Mutation: 68 strains or lines available

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)