Srrm3^{Gt(IST12726F8)Tigm}
Gene trapped Allele Detail

Summary

• Symbol: Srrm3^{Gt(IST12726F8)Tigm}
• Name: serine/arginine repetitive matrix 3; gene trap IST12726F8, Texas A&M Institute for Genomic Medicine
• MGI ID: MGI:4088169
• Synonyms: Srrm3^gt
• Gene: Srrm3 Location: Chr5:135835744-135903626 bp, + strand Genetic Position: Chr5, 75.42 cM, cytoband G1
• Alliance: Srrm3^{Gt(IST12726F8)Tigm} page

Mutation origin

• Mutant Cell Line: IST12726F8
• Germline Transmission: Earliest citation of germline transmission: J:281311
• Parent Cell Line: Lex3.13 (ES Cell)
• Strain of Origin: C57BL/6N

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: VICTR76 Vector Type: gene trap
• Mutation details: Trapped gene association determined by genome coordinate overlap and strand. In this line, the gene trap vector inserted into the third intron of the gene. RT-PCR testing showed that the gene trap insertion prevents expression of the gene. (J:281311)
• Sequence Tags: Sequence tag details (2 tags)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  IST12726F8BBF1	EF940725 ; (MGI Seq Detail)	inverse PCR	Chr5:135874451-135874572 bp (-)
  IST12726F8HMF1	EF939228 ; (MGI Seq Detail)	inverse PCR	Chr5:135874493-135874572 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  8 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Mice Carrying this Mutation:	225 assay results 2 RNA-Seq or microarray experiment(s)
In Structures Affected by this Mutation:	2 anatomical structure(s)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Srrm3 Mutation: 28 strains or lines available

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)