Snx5^Gt(XA155)Byg
Gene trapped Allele Detail

Summary

• Symbol: Snx5^Gt(XA155)Byg
• Name: sorting nexin 5; gene trap XA155, BayGenomics
• MGI ID: MGI:4123839
• Gene: Snx5 Location: Chr2:144092043-144112713 bp, - strand Genetic Position: Chr2, 70.98 cM, cytoband H1
• Alliance: Snx5^Gt(XA155)Byg page

Growth retardation phenotype in Snx5^Gt(XA155)Byg/Snx5^Gt(XA155)Byg mice at P30

Show the 4 phenotype image(s) involving this allele.

Mutation origin

• Mutant Cell Line: XA155
• Germline Transmission: Earliest citation of germline transmission: J:199909
• Parent Cell Line: Other (see notes) (ES Cell)
• Strain of Origin: 129P2/OlaHsd

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: pGT0pfs Vector Type: gene trap
• Mutation details: The gene trap vector inserted into intron 7. Western blot analysis confirmed the absence of protein expression in lungs. (J:199909)
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  XA155	CC144501 ; (MGI Seq Detail)	5' RACE	Chr2:144099021-144102708 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  41 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Generation of the Snx5^Gt(XA155)Byg allele

Expression

In Mice Carrying this Mutation:	1 RNA-Seq or microarray experiment(s)
In Structures Affected by this Mutation:	5 anatomical structure(s)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Snx5 Mutation: 27 strains or lines available

Notes

All BayGenomics gene trap mutations were generated in either CGR8 or E14TG2a (129P2/OlaHsd) parental ES cell lines, with the majority in subline E14TG2a.4. The specific ES cell line in which each mutation was made is not specified.

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)