Pdlim1^Gt(XC262)Byg
Gene trapped Allele Detail

Summary

• Symbol: Pdlim1^Gt(XC262)Byg
• Name: PDZ and LIM domain 1 (elfin); gene trap XC262, BayGenomics
• MGI ID: MGI:4124892
• Synonyms: Clp36^deltaLIM
• Gene: Pdlim1 Location: Chr19:40210683-40260060 bp, - strand Genetic Position: Chr19, 34.24 cM, cytoband D1
• Alliance: Pdlim1^Gt(XC262)Byg page

Mutation origin

• Mutant Cell Line: XC262
• Germline Transmission: Earliest citation of germline transmission: J:212221
• Parent Cell Line: Other (see notes) (ES Cell)
• Strain of Origin: 129P2/OlaHsd

Mutation description

• Allele Type: Gene trapped (Hypomorph, Reporter)
• Mutation: Insertion of gene trap vector Vector: pGT1Lxf Vector Type: gene trap
• Mutation details: The lacZ-containing gene trap inserted between exon 5 and 6. Western blot analysis confirmed very low level expression of the fusion protein. (J:212221)
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  XC262	CC178230 ; (MGI Seq Detail)	5' RACE	Chr19:40218952-40232042 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  12 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Pdlim1 Mutation: 32 strains or lines available

Notes

All BayGenomics gene trap mutations were generated in either CGR8 or E14TG2a (129P2/OlaHsd) parental ES cell lines, with the majority in subline E14TG2a.4. The specific ES cell line in which each mutation was made is not specified.

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)