Pdlim5^Gt(XH199)Byg
Gene trapped Allele Detail

Summary

• Symbol: Pdlim5^Gt(XH199)Byg
• Name: PDZ and LIM domain 5; gene trap XH199, BayGenomics
• MGI ID: MGI:4126899
• Gene: Pdlim5 Location: Chr3:141945351-142101454 bp, - strand Genetic Position: Chr3, 66.69 cM, cytoband H3
• Alliance: Pdlim5^Gt(XH199)Byg page

Mutation origin

• Mutant Cell Line: XH199
• Germline Transmission: Earliest citation of germline transmission: J:200039
• Parent Cell Line: Other (see notes) (ES Cell)
• Strain of Origin: 129P2/OlaHsd

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: pGT1Lxf Vector Type: gene trap
• Mutation details: The beta-geo (lacZ and neomycin resistance cassette) containing gene trap vector inserted between exon 8 and 9. Western blot analysis confirmed reduced protein expression in the brain of heterozygous mice. (J:200039)
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  XH199	CC200043 ; (MGI Seq Detail)	5' RACE	Chr3:141983580-142010180 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  16 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Schematic for the generation of the Pdlim5^Gt(XH199)Byg allele

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Pdlim5 Mutation: 62 strains or lines available

Notes

All BayGenomics gene trap mutations were generated in either CGR8 or E14TG2a (129P2/OlaHsd) parental ES cell lines, with the majority in subline E14TG2a.4. The specific ES cell line in which each mutation was made is not specified.

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)