Abcf1^Gt(XK097)Byg
Gene trapped Allele Detail

Summary

• Symbol: Abcf1^Gt(XK097)Byg
• Name: ATP-binding cassette, sub-family F member 1; gene trap XK097, BayGenomics
• MGI ID: MGI:4127483
• Gene: Abcf1 Location: Chr17:36267711-36280642 bp, - strand Genetic Position: Chr17, 18.8 cM
• Alliance: Abcf1^Gt(XK097)Byg page

Mutation origin

• Mutant Cell Line: XK097
• Germline Transmission: Earliest citation of germline transmission: J:245222
• Parent Cell Line: Other (see notes) (ES Cell)
• Strain of Origin: 129P2/OlaHsd

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: pGT0Lxf Vector Type: gene trap
• Mutation details: The gene trap vector inserted into the intronic sequence between exon 7 and exon 8. A fusion protein consisting of the amino acids coded by exons 1-7 to beta-galactosidase is expressed. (J:245222)
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  XK097	CC248847 ; (MGI Seq Detail)	5' RACE	Chr17:36274240-36274916 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  12 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Mice Carrying this Mutation:

57 assay results

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Abcf1 Mutation: 39 strains or lines available

Notes

All BayGenomics gene trap mutations were generated in either CGR8 or E14TG2a (129P2/OlaHsd) parental ES cell lines, with the majority in subline E14TG2a.4. The specific ES cell line in which each mutation was made is not specified.

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 4 reference(s)