Phdlc4^{129S6/SvEvTac-Apoe-tm4Mae}
QTL Variant Detail

Summary

• QTL variant: Phdlc4^{129S6/SvEvTac-Apoe-tm4Mae}
• Name: plasma HDL cholesterol 4; 129S6/SvEvTac-Apoe^tm4Mae
• MGI ID: MGI:5644673
• QTL: Phdlc4 Location: unknown Genetic Position: Chr1, Syntenic

Variant origin

• Strain of Specimen: 129S6/SvEvTac-Apoe^tm4Mae

Variant description

• Allele Type: QTL
• Inheritance: Not Specified

Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:208464

Linkage analysis was performed on 172 male (129S6/SvEvTac-Apoe^tm4Mae x D2.129P2(B6)-Apoe^tm1Unc/J)F2 intercross mice using 170 SNP markers to identify QTL associated with plasma HDL cholesterol level.

QTL Phdlc4 maps to 27-47 Mb (36-64 cM) on Chromosome 1 with a peak LOD score of 3.9 at 126 Mb (48 cM) in linkage with plasma HDL cholesterol level. 129S6/SvEvTac-Apoe alleles confer increased plasma HDL cholesterol levels.

References

• Original: J:208464 Kayashima Y, et al., Quantitative trait loci affecting atherosclerosis at the aortic root identified in an intercross between DBA2J and 129S6 apolipoprotein E-null mice. PLoS One. 2014;9(2):e88274
• All: 1 reference(s)