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Smc5tm1c(KOMP)Wtsi
Targeted Allele Detail
Summary
Symbol: Smc5tm1c(KOMP)Wtsi
Name: structural maintenance of chromosomes 5; targeted mutation 1c, Wellcome Trust Sanger Institute
MGI ID: MGI:5882565
Synonyms: Smc5flox
Gene: Smc5  Location: Chr19:23183815-23251261 bp, - strand  Genetic Position: Chr19, 18.04 cM
Alliance: Smc5tm1c(KOMP)Wtsi page
IMPC: Smc5 gene page
Mutation
origin
Mutant Cell Line:  EPD0395_1_F05
Germline Transmission:  Earliest citation of germline transmission: J:240155
Parent Cell Line:  JM8A3.N1 (ES Cell)
Strain of Origin:  C57BL/6N-Atm1Brd
Project Collection: KOMP-CSD
Mutation
description
Allele Type:    Targeted (Conditional ready)
Mutation:    Insertion     Vector: L1L2_Bact_P
 
Mutation detailsThe L1L2_Bact_P cassette was inserted at position 23240733 of Chromosome 19 upstream of the critical exon(s) (Build GRCm39). The cassette is composed of an FRT site followed by lacZ sequence and a loxP site. This first loxP site is followed by neomycin resistance gene under the control of the human beta-actin promoter, SV40 polyA, a second FRT site and a second loxP site. A third loxP site is inserted downstream of the targeted exon(s) at position 23241614. The critical exon(s) is/are thus flanked by loxP sites. A "conditional ready" (floxed) allele was created by flp recombinase expression in mice carrying this allele to remove the lacZ sequence and neo selection cassette, leaving loxP sites flanking the critical exon(s). (J:240155)
Phenotypes
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View phenotypes and curated references for all genotypes (concatenated display).
Find Mice (IMSR)
Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
Carrying this Mutation:  Mouse Strains: 0 strains available      Cell Lines: 0 lines available
Carrying any Smc5 Mutation:  42 strains or lines available
References
Original:  J:240155 Pryzhkova MV, et al., Conditional mutation of Smc5 in mouse embryonic stem cells perturbs condensin localization and mitotic progression. J Cell Sci. 2016 Apr 15;129(8):1619-34
All:  5 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/29/2024
MGI 6.24
The Jackson Laboratory