About   Help   FAQ
Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Gli2tm2.1Alj
targeted mutation 2.1, Alexandra L Joyner
MGI:2158472
Summary 13 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Gli2tm2.1Alj/Gli2tm2.1Alj either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) MGI:2173467
hm2
Gli2tm2.1Alj/Gli2tm2.1Alj involves: 129S6/SvEvTac * Black Swiss * Swiss Webster MGI:3795685
hm3
Gli2tm2.1Alj/Gli2tm2.1Alj involves: 129S6/SvEvTac * C57BL/6 * Swiss Webster MGI:4941343
ht4
Gli2tm1Alj/Gli2tm2.1Alj either: (involves: 129) or (involves: 129 * Black Swiss) MGI:2173471
ht5
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) MGI:3846347
ht6
Gli2tm2.1Alj/Gli2tm3(Gli1)Alj either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss) MGI:3846348
cx7
Gli2tm2.1Alj/Gli2tm2.1Alj
Shhtm1Chg/Shhtm1Chg
either: (involves: 129) or (involves: 129 * Black Swiss) MGI:2173463
cx8
Gli2tm2.1Alj/Gli2+
Shhtm1Chg/Shhtm1Chg
either: (involves: 129) or (involves: 129 * Black Swiss) MGI:3846351
cx9
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj
Shhtm1Chg/Shhtm1Chg
either: (involves: 129) or (involves: 129 * Black Swiss) MGI:3846352
cx10
Gli2tm2.1Alj/Gli2tm2.1Alj
Gli3Xt-J/Gli3+
involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ * C57BL/6 * Swiss Webster MGI:3795688
cx11
Gli2tm2.1Alj/Gli2tm2.1Alj
Gli3Xt-J/Gli3Xt-J
involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ * C57BL/6 * Swiss Webster MGI:3795689
cx12
Gli2tm2.1Alj/Gli2+
Gli3Xt-J/Gli3Xt-J
involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ * C57BL/6 * Swiss Webster MGI:3795690
cx13
Gli2tm2.1Alj/Gli2tm2.1Alj
Tmem107schlei/Tmem107schlei
involves: 129S6/SvEvTac * C3HeB/FeJ * C57BL/6J MGI:5433095


Genotype
MGI:2173467
hm1
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Genetic
Background
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at E10.5 cells that express Shh and Foxa2 are absent
• at E10.5 motor neurons occupy the ventral midline of the spinal cord
• the notochord is situated closer to the spinal cord
• decrease in the number of spinal cord V3 interneurons that are normally adjacent to the floor plate at E10.5

embryo
• at E10.5 cells that express Shh and Foxa2 are absent
• at E10.5 cells that express Shh and Foxa2 are absent
• the notochord is situated closer to the spinal cord
• the notochord fails to regress

respiratory system
• the accessory lobe is absent




Genotype
MGI:3795685
hm2
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Genetic
Background
involves: 129S6/SvEvTac * Black Swiss * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging

reproductive system
N
• embryos show normal mammary gland development at E13




Genotype
MGI:4941343
hm3
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Genetic
Background
involves: 129S6/SvEvTac * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
embryo
• the Nkx2-2 expressing domains are absent and the motor neurons appear fused together

nervous system
• the Nkx2-2 expressing domains are absent and the motor neurons appear fused together
• in the floor plate the motor neurons appear fused together




Genotype
MGI:2173471
ht4
Allelic
Composition
Gli2tm1Alj/Gli2tm2.1Alj
Genetic
Background
either: (involves: 129) or (involves: 129 * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm1Alj mutation (0 available); any Gli2 mutation (169 available)
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at E10.5 cells that express Shh and Foxa2 are absent
• at E10.5 motor neurons occupy the ventral midline of the spinal cord
• the notochord is situated closer to the spinal cord
• decrease in the number of spinal cord V3 interneurons that are normally adjacent to the floor plate at E10.5

embryo
• at E10.5 cells that express Shh and Foxa2 are absent
• at E10.5 cells that express Shh and Foxa2 are absent
• the notochord is situated closer to the spinal cord
• the notochord fails to regress

respiratory system
• the accessory lobe is absent




Genotype
MGI:3846347
ht5
Allelic
Composition
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj
Genetic
Background
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
N
• unlike in homozygous null mice, at E10.5 the floor plate is present, interneurons are found in the appropriate location, and notochord regression is normal

respiratory system
N
• unlike in homozygous null mice, at E12.5 lung size is normal and the accessory lobe is present

integument
• gradual loss of hair beginning on the dorsal neck and preceding caudally down the back in mice over 3 weeks of age
• around 5 months of age mice lack hair around the neck




Genotype
MGI:3846348
ht6
Allelic
Composition
Gli2tm2.1Alj/Gli2tm3(Gli1)Alj
Genetic
Background
either: (involves: 129S6/SvEvTac) or (involves: 129S6/SvEvTac * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli2tm3(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
normal phenotype
• viable with no gross abnormalities
• unlike in homozygous null mice, at E10.5 the floor plate is present, interneurons are found in the appropriate location, and notochord regression is normal
• unlike in homozygous null mice, at E12.5 lung size is normal and the accessory lobe is present




Genotype
MGI:2173463
cx7
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Shhtm1Chg/Shhtm1Chg
Genetic
Background
either: (involves: 129) or (involves: 129 * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Shhtm1Chg mutation (2 available); any Shh mutation (48 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at E10.5
• absent from the spinal cord at E10.5

vision/eye
• at E10.5

embryo
• at E10.5




Genotype
MGI:3846351
cx8
Allelic
Composition
Gli2tm2.1Alj/Gli2+
Shhtm1Chg/Shhtm1Chg
Genetic
Background
either: (involves: 129) or (involves: 129 * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Shhtm1Chg mutation (2 available); any Shh mutation (48 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
embryo

nervous system
• fused telencephalic vesicles are seen at E10.5
• loss of many ventral tissues is seen at E10.5

growth/size/body




Genotype
MGI:3846352
cx9
Allelic
Composition
Gli2tm2.1Alj/Gli2tm3.1(Gli1)Alj
Shhtm1Chg/Shhtm1Chg
Genetic
Background
either: (involves: 129) or (involves: 129 * Black Swiss)
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli2tm3.1(Gli1)Alj mutation (0 available); any Gli2 mutation (169 available)
Shhtm1Chg mutation (2 available); any Shh mutation (48 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• at E10.5
• in about half of mice development of the diencephalic vesicles is partially rescued with partial separation into 2 vesicles seen at E10.5 or E11.5
• absent from the spinal cord at E10.5
• absence of V3 interneurons at E10.5

embryo
• at E10.5

growth/size/body
• head size is increased compared to mice homozygous null for Shh alone




Genotype
MGI:3795688
cx10
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Gli3Xt-J/Gli3+
Genetic
Background
involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli3Xt-J mutation (3 available); any Gli3 mutation (81 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
N
• embryos show normal mammary gland development




Genotype
MGI:3795689
cx11
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Gli3Xt-J/Gli3Xt-J
Genetic
Background
involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli3Xt-J mutation (3 available); any Gli3 mutation (81 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging




Genotype
MGI:3795690
cx12
Allelic
Composition
Gli2tm2.1Alj/Gli2+
Gli3Xt-J/Gli3Xt-J
Genetic
Background
involves: 129S6/SvEvTac * Black Swiss * C3H/HeJ * C57BL/6 * Swiss Webster
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Gli3Xt-J mutation (3 available); any Gli3 mutation (81 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
endocrine/exocrine glands
• some embryos lack mammary bud pair number 3 and number 5

integument
• some embryos lack mammary bud pair number 3 and number 5




Genotype
MGI:5433095
cx13
Allelic
Composition
Gli2tm2.1Alj/Gli2tm2.1Alj
Tmem107schlei/Tmem107schlei
Genetic
Background
involves: 129S6/SvEvTac * C3HeB/FeJ * C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Gli2tm2.1Alj mutation (1 available); any Gli2 mutation (169 available)
Tmem107schlei mutation (0 available); any Tmem107 mutation (21 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
embryo
• mice exhibit loss of floor plate cells and V3 interneurons
• however, dorsal expansion of V2 interneuron progenitors observed in Tmem107schlei homozygotes is blocked

nervous system
• mice exhibit loss of floor plate cells and V3 interneurons
• however, dorsal expansion of V2 interneuron progenitors observed in Tmem107schlei homozygotes is blocked





Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/10/2024
MGI 6.24
The Jackson Laboratory