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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Hoxa11tm1Mrc
targeted mutation 1, Mario R Capecchi
MGI:2389126
Summary 19 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Hoxa11tm1Mrc/Hoxa11tm1Mrc Not Specified MGI:3810823
ht2
Hoxa11tm1Mrc/Hoxa11+ Not Specified MGI:3810824
cx3
Hoxa11tm1Mrc/Hoxa11+
Hoxd11tm1Mrc/Hoxd11+
involves: 129S7/SvEvBrd MGI:3810825
cx4
Hoxa11tm1Mrc/Hoxa11+
Hoxd11tm1Mrc/Hoxd11tm1Mrc
involves: 129S7/SvEvBrd MGI:3810827
cx5
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm1Mrc
involves: 129S7/SvEvBrd MGI:3810837
cx6
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm1Mrc/Hoxd11+
involves: 129S7/SvEvBrd MGI:3810838
cx7
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11+
involves: 129S7/SvEvBrd MGI:3814871
cx8
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11+
involves: 129S7/SvEvBrd MGI:3814872
cx9
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11+
involves: 129S7/SvEvBrd MGI:3814873
cx10
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11tm1Mrc
involves: 129S7/SvEvBrd MGI:3814874
cx11
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm1Mrc
involves: 129S7/SvEvBrd MGI:3814876
cx12
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11tm1Mrc
involves: 129S7/SvEvBrd MGI:3814878
cx13
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm1Mrc
involves: 129S7/SvEvBrd MGI:3814879
cx14
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11tm1Mrc
involves: 129S7/SvEvBrd MGI:3814881
cx15
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11+
involves: 129S7/SvEvBrd MGI:3814882
cx16
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm2.1(Hoxd11)Mrc
involves: 129S7/SvEvBrd * BALB/cJ MGI:3810836
cx17
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm2.1(Hoxd11)Mrc/Hoxd11+
involves: BALB/cJ MGI:3810830
cx18
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm2.1(Hoxd11)Mrc/Hoxd11tm2.1(Hoxd11)Mrc
involves: BALB/cJ MGI:3810831
cx19
Hoxa11tm1Mrc/Hoxa11+
Hoxd11tm2.1(Hoxd11)Mrc/Hoxd11tm2.1(Hoxd11)Mrc
involves: BALB/cJ MGI:3810839


Genotype
MGI:3810823
hm1
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Genetic
Background
Not Specified
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• 3 of 9 male mice are fertile

skeleton
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice

limbs/digits/tail
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice




Genotype
MGI:3810824
ht2
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Genetic
Background
Not Specified
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
N
• mice exhibit a normal number of lumbar vertebrae




Genotype
MGI:3810825
cx3
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxd11tm1Mrc/Hoxd11+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton




Genotype
MGI:3810827
cx4
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxd11tm1Mrc/Hoxd11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton




Genotype
MGI:3810837
cx5
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes

renal/urinary system
• bilateral kidney hypoplasia present at birth
• occasionally seen
• at E13.5 the ureter's route to the kidney is circuitous and abnormal; transversing anteriorly around the kidney to the lateral side before entering the kidney

limbs/digits/tail
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes




Genotype
MGI:3810838
cx6
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm1Mrc/Hoxd11+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• the proximal carpal bones, navicular lunate and psiform are fused in all mice
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes

limbs/digits/tail
• the proximal carpal bones, navicular lunate and psiform are fused in all mice
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice and Hoxa11tm1Mrc homozygotes




Genotype
MGI:3814871
cx7
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• show reproductive defects similar to those of mice homozygous for Hoxa11tm1Mrc




Genotype
MGI:3814872
cx8
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• show reproductive defects similar to those of mice homozygous for Hoxa11tm1Mrc




Genotype
MGI:3814873
cx9
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• show reproductive defects similar to those of mice homozygous for Hoxa11tm1Mrc




Genotype
MGI:3814874
cx10
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• show reproductive defects similar to those of mice homozygous for Hoxa11tm1Mrc




Genotype
MGI:3814876
cx11
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• at E11.5 increased apoptosis is seen in the condensed blastemal mesenchyme
• absence of metanephric kidney development at E13.5 and birth
• at E11.5 increased apoptosis is seen in the condensed blastemal mesenchyme
• absence of metanephric kidney development at E13.5 and birth
• absence of bud formation at E11.5

cellular
• at E11.5 increased apoptosis is seen in the condensed blastemal mesenchyme

embryo
• at E11.5 increased apoptosis is seen in the condensed blastemal mesenchyme




Genotype
MGI:3814878
cx12
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• bilateral kidney hypoplasia that is less severe than in Hoxa11tm1Mrc Hoxd11tm1Mrc double homozygotes
• occasionally seen




Genotype
MGI:3814879
cx13
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• hypoplasia is more severe than in mice with 4 mutant alleles
• kidneys, when present, are in a more caudal and ventral location
• occasionally seen
• more frequent than in mice with 4 mutant alleles
• at E11.5, the bud forms but frequently migrates away from the metanephric mesenchyme




Genotype
MGI:3814881
cx14
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11+
Hoxd11tm1Mrc/Hoxd11tm1Mrc
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• hypoplasia is more severe than in mice with 4 mutant alleles
• kidneys, when present, are in a more caudal and ventral location
• occasionally seen
• more frequent than in mice with 4 mutant alleles
• at E11.5, the bud forms but frequently migrates away from the metanephric mesenchyme




Genotype
MGI:3814882
cx15
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxc11tm1Mrc/Hoxc11tm1Mrc
Hoxd11tm1Mrc/Hoxd11+
Genetic
Background
involves: 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxc11tm1Mrc mutation (0 available); any Hoxc11 mutation (14 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
renal/urinary system
• hypoplasia is more severe than in mice with 4 mutant alleles
• kidneys, when present, are in a more caudal and ventral location
• occasionally seen
• more frequent than in mice with 4 mutant alleles
• at E11.5, the bud forms but frequently migrates away from the metanephric mesenchyme




Genotype
MGI:3810836
cx16
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm1Mrc/Hoxd11tm2.1(Hoxd11)Mrc
Genetic
Background
involves: 129S7/SvEvBrd * BALB/cJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm1Mrc mutation (0 available); any Hoxd11 mutation (14 available)
Hoxd11tm2.1(Hoxd11)Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• the proximal carpal bones and navicular lunate are fused in four of five mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice

limbs/digits/tail
• the proximal carpal bones and navicular lunate are fused in four of five mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice
• forearm bones are shorter and broader than in wild-type mice




Genotype
MGI:3810830
cx17
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm2.1(Hoxd11)Mrc/Hoxd11+
Genetic
Background
involves: BALB/cJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm2.1(Hoxd11)Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system
• 4 of 10 mice are fertile

skeleton
N
• mice exhibit a normal number of lumbar vertebrae
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes

limbs/digits/tail
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes
• forearm bones are shorter and broader than in wild-type mice but not as severely affected as in Hoxa11tm1Mrc homozygotes




Genotype
MGI:3810831
cx18
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11tm1Mrc
Hoxd11tm2.1(Hoxd11)Mrc/Hoxd11tm2.1(Hoxd11)Mrc
Genetic
Background
involves: BALB/cJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm2.1(Hoxd11)Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
reproductive system

skeleton
N
• mice exhibit a normal number of lumbar vertebrae

limbs/digits/tail
N
• forearm bones are normal




Genotype
MGI:3810839
cx19
Allelic
Composition
Hoxa11tm1Mrc/Hoxa11+
Hoxd11tm2.1(Hoxd11)Mrc/Hoxd11tm2.1(Hoxd11)Mrc
Genetic
Background
involves: BALB/cJ
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa11tm1Mrc mutation (0 available); any Hoxa11 mutation (11 available)
Hoxd11tm2.1(Hoxd11)Mrc mutation (0 available); any Hoxd11 mutation (14 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
N
• mice exhibit a normal number of lumbar vertebrae





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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory