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Gene Expression Data
Assay Details
Assay
Reference: J:49133 Hallonet M, et al., Vax1 is a novel homeobox-containing gene expressed in the developing anterior ventral forebrain. Development. 1998 Jul;125(14):2599-610
Assay type: RNA in situ
MGI Accession ID: MGI:1303399
Gene symbol: Vax1
Gene name: ventral anterior homeobox 1
Probe: cf5
Probe preparation: Antisense labelled with radioactivity RNA
Results
Specimen 7B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 7B Expression is present in the basal forebrain in the ventricular and deep subventricular zones of the septum. It is not present in the amygdala.
TS21: hypothalamus Present Regionally restricted 7B Expression is present in the anterior hypothalamus.
TS21: lateral ganglionic eminence Present 7B
TS21: medial ganglionic eminence Present 7B
TS21: cerebral cortex Absent 7B

Specimen 7E: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 7E Expression is present in the basal forebrain in the ventricular and deep subventricular zones of the septum. It is not present in the amygdala.
TS21: hypothalamus Present Regionally restricted 7E Expression is present in the anterior hypothalamus. It is present throughout the entire preoptic area, as well as the suprachiasmatic area.
TS21: lateral ganglionic eminence Present 7E
TS21: medial ganglionic eminence Present 7E

Specimen 7H: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hypothalamus Present Regionally restricted 7H Expression is present in the preoptic area.
TS21: retina Present Regionally restricted 7H Expression is present in the optic disc.
TS21: optic chiasma Present 7H
TS21: optic nerve Present 7H

Specimen 8B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 8B Expression is present in ventricular and deep subventricular zone of the septum.
TS21: hypothalamus Present Regionally restricted 8B Expression is present in the anterior hypothalamus, the preoptic area, as well as the suprachiasmatic area.
TS21: lateral ganglionic eminence Present Regionally restricted 8B

Specimen 8E: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: telencephalon Present Regionally restricted 8E Expression is present in ventricular and deep subventricular zone of the septum.
TS21: hypothalamus Present Regionally restricted 8E Expression is present in the preoptic area and the suprachiasmatic area.

Specimen 9A: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: ganglionic eminence Present 9A
TS21: cerebral cortex Absent 9A

Specimen 10B: embryonic day 13.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS21: forebrain Present Regionally restricted 10B In the mutant ectopic expression extends towards the developing cortex at the level of the subventricular zone.
TS21: lateral ganglionic eminence Present Regionally restricted 10B Expression is limited laterally in the ventricular zone of the mutant lateral ganglionic eminence.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory