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Gene Expression Data
Assay Details
Assay
Reference: J:49648 Sefton M, et al., Conserved and divergent roles for members of the Snail family of transcription factors in the chick and mouse embryo. Development. 1998 Aug;125(16):3111-21
Assay type: RNA in situ
MGI Accession ID: MGI:1328418
Gene symbol: Snai1
Gene name: snail family zinc finger 1
Probe: mSna cDNA3
Probe preparation: labelled with digoxigenin RNA
Results
Specimen 2H: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo mesoderm Strong 2H mSna expression is particularly strong in the mesoderm as it migrates from the primitive streak.

Specimen 2J: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: migrating neural crest Present Regionally restricted 2J Sna was observed in both premigratory and migratory cephalic neural crest cells. Transcripts were expressed in a greater number of migratory crest cells than mSlu.
TS13: neural crest Present Regionally restricted 2J Sna was observed in both premigratory and migratory cephalic neural crest cells. Transcripts were expressed in a greater number of migratory crest cells than mSlu.
TS13: trunk paraxial mesenchyme Present Regionally restricted 2J A distinct domain of expression in the paraxial mesoderm was observed immediately prior to the last-formed somite, which is separated from the rest of the paraxial mesoderm by a non-expressing domain.

Specimen 2L: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: migrating neural crest Present Regionally restricted 2L Sna was observed in both premigratory and migratory cephalic neural crest cells. Transcripts were expressed in a greater number of migratory crest cells than mSlu.
TS13: neural crest Present Regionally restricted 2L Sna was observed in both premigratory and migratory cephalic neural crest cells. Transcripts were expressed in a greater number of migratory crest cells than mSlu.

Specimen 3F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk paraxial mesenchyme Present Regionally restricted 3F A distinct domain of expression in the paraxial mesoderm was observed immediately prior to the last-formed somite, which is separated from the rest of the paraxial mesoderm by a non-expressing domain.
TS15: forelimb bud Present 3F

Specimen 3H: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo Present 3H

Specimen 4F: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain neural crest Present 4F

Specimen 4H: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future brain neural crest Present 4H

Specimen 4J: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: migrating neural crest Present Regionally restricted 4J Sna was observed in both premigratory and migratory cephalic neural crest cells. Transcripts were expressed in a greater number of migratory crest cells than mSlu.
TS15: neural crest Present Regionally restricted 4J Sna was observed in both premigratory and migratory cephalic neural crest cells. Transcripts were expressed in a greater number of migratory crest cells than mSlu.

Specimen 4N: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: branchial arch mesenchyme derived from neural crest Present 4N

Specimen 5E: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Present Regionally restricted 5E mSna is present in both the primitive streak and early mesoderm.
TS13: primitive streak Present Regionally restricted 5E mSna is present in both the primitive streak and early mesoderm.

Specimen 6F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk paraxial mesenchyme Present Regionally restricted 6F A distinct domain of expression in the paraxial mesoderm was observed immediately prior to the last-formed somite, which is separated from the rest of the paraxial mesoderm by a non-expressing domain.

Specimen 6H: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk paraxial mesenchyme Present Regionally restricted 6H A distinct domain of expression in the paraxial mesoderm was observed immediately prior to the last-formed somite, which is separated from the rest of the paraxial mesoderm by a non-expressing domain.`

Specimen 7D: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head somite Present Regionally restricted 7D mSna was confined to cells situated ventrally in the somites, most probably cells undergoing epithelial-to-mesenchyme transition.
TS13: trunk somite Present Regionally restricted 7D mSna was confined to cells situated ventrally in the somites, most probably cells undergoing epithelial-to-mesenchyme transition.

Specimen 7H: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head somite Present Regionally restricted 7H mSna was confined to cells situated ventrally in the somites, most probably cells undergoing epithelial-to-mesenchyme transition.
TS13: trunk somite Present Regionally restricted 7H mSna was confined to cells situated ventrally in the somites, most probably cells undergoing epithelial-to-mesenchyme transition.

Specimen 7L: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: myotome Present 7L
TS15: neural crest Present 7L
TS15: sclerotome Present 7L
TS15: dermatome Absent

Specimen 8E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Present Regionally restricted 8E mSna transcripts were observed in a more extensive domain of the limb bud mesenchyme than mSlu transcripts.
TS15: forelimb bud ectoderm Absent 8E

Specimen 8F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Present Regionally restricted 8F mSna transcripts were observed in a more extensive domain of the limb bud mesenchyme than mSlu transcripts.
TS15: forelimb bud ectoderm Absent 8F

Specimen 8K: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hand Present 8K

Specimen 9D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: eye Absent 9D

Specimen 10B: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: lateral plate mesoderm Present Regionally restricted 10B


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory