Gene Expression Data
Assay Details
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Assay
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Reference:
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J:52599
Mendelsohn C, et al., Stromal cells mediate retinoid-dependent functions essential for renal development. Development. 1999 Mar;126(6):1139-48
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1330418
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Gene symbol:
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Foxd1
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Gene name:
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forkhead box D1
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Probe:
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BF-2 cDNA3
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1E:
embryonic day 12.0
(more  )
Specimen
1E:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 12.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: metanephros |
Present |
Regionally restricted |
1E
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Expression was absent from the stromal cells that surround the ureter but was detected in the renal capsule and in the stromal cells surrounding the ureteric bud and metanephric mesenchyme.
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| TS20: mesenchyme of metanephros |
Absent |
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1E
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| TS20: ureteric tip |
Absent |
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1E
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Expression was absent from the ureteric bud.
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Specimen
1F:
embryonic day 14.0
(more )
Specimen
1F:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: metanephros |
Present |
Regionally restricted |
1F
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Expression was detected in the renal capsule and in the subcapsular stromal cells.
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| TS22: renal medullary interstitium |
Trace |
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1F
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Expression was absent or barely detectable in the cortico-medullary stromal cells.
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Specimen
6C:
embryonic day 14.0
(more )
Note: The plane of section is transverse.
Specimen
6C:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 14.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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The plane of section is transverse.
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Specimen
6D:
(close )
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Genetic Background:
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involves: 129S2/SvPas
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Mutant Allele(s):
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Raratm1Ipc/Raratm1Ipc
Rarbtm1Ipc/Rarbtm1Ipc
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Age:
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embryonic day 14.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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The plane of section is transverse.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS22: renal medullary interstitium |
Present |
Regionally restricted |
6D
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Expression was maintained in the abnormally distributed mutant subcapsular stromal cells in a thick ring encircling the kidney.
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