Gene Expression Data
Assay Details
Assay
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Reference:
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J:32033
McKay IJ, et al., The role of FGF-3 in early inner ear development: an analysis in normal and kreisler mutant mice. Dev Biol. 1996 Mar 15;174(2):370-8
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1336140
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Gene symbol:
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Fgf3
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Gene name:
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fibroblast growth factor 3
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Probe:
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FGF-3g
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Probe preparation:
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Antisense labelled with S35 RNA
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Assay notes:
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FGF-3 expression in heterozygous kreisler embryos appears identical to that seen in wild-type controls.
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Results
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Specimen
1A:
embryonic day 8.0
(more )
Note: 5 somites.
Specimen
1A:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
5 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: future hindbrain |
Present |
Regionally restricted |
1A
|
In the developing head, expression is seen within a large portion of the hindbrain.
|
TS12: embryo ectoderm |
Present |
Regionally restricted |
1A
|
Expression is seen in the dorsal head ectoderm. In the dorsoventral axis, expression extends from a dorsal-most limit at the junction with the neural crest to a ventral-most limit alongside the foregut.
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TS12: future hindbrain neural crest |
Absent |
|
1A
|
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Specimen
1B:
embryonic day 8.5
(more )
Note: 9 somites.
Specimen
1B:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
9 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: embryo ectoderm |
Present |
Regionally restricted |
1B
|
The expression domain in the head surface ectoderm includes the developing otic placode and probably some of its immediate neighborhood.
|
TS13: otic placode |
Present |
|
1B
|
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TS13: future hindbrain |
Present |
Spotted |
1B
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Expression can be seen to extend from the midbrain-hindbrain junction down to rhombomere 6. The expression in the anterior hindbrain is somewhat diffuse and is clearly at much lower level than rhombomeres 5 and 6, where expression is upregulated.
|
TS13: future hindbrain posterior to rhombomere 5 |
Strong |
|
1B
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In rhombomeres 5 and 6, expression is upregulated.
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TS13: rhombomere 5 |
Strong |
|
1B
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In rhombomeres 5 and 6, expression is upregulated.
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Specimen
1C:
embryonic day 8.5
(more )
Note: 10 somites. transverse section
Specimen
1C:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
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Type:
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section
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Note:
|
10 somites. transverse section
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: embryo ectoderm |
Present |
Regionally restricted |
1C
|
The expression domain in the head surface ectoderm includes the developing otic placode and probably some of its immediate neighborhood.
|
TS13: otic placode |
Present |
Regionally restricted |
1C
|
|
TS13: branchial arch |
Present |
Regionally restricted |
1C
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Expressed is present in the endoderm lining the ends of the pharyngeal pouches.
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Specimen
1D:
embryonic day 8.5
(more )
Note: 10 somites. sagittal section
Specimen
1D:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
10 somites. sagittal section
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: branchial arch |
Present |
Regionally restricted |
1D
|
Expressed is present in the endoderm lining the ends of the pharyngeal pouches.
|
Specimen
1E:
embryonic day 9.0
(more )
Note: 13 somites.
Specimen
1E:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 9.0
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Sex:
|
Not Specified
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Type:
|
section
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Note:
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13 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: otic pit |
Weak |
Regionally restricted |
1E
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When the otic placode has invaginated to form a shallow cup, the expression in this patch of ectoderm has begun to fade, and only the ventral-most portion of the cup still shows expression.
|
TS14: otic placode |
Weak |
Regionally restricted |
1E
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When the otic placode has invaginated to form a shallow cup, the expression in this patch of ectoderm has begun to fade, and only the ventral-most portion of the cup still shows expression.
|
Specimen
not shown:
embryonic day 9.0
(more )
Note: 14-16 somites.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
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Type:
|
Not Specified
|
Note:
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14-16 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: ear |
Absent |
|
|
By the 14- to 16-somite stage, no expression in the otic rudiment is visible.
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Specimen
1F:
embryonic day 9.0
(more )
Note: 14 somites.
Specimen
1F:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Age:
|
embryonic day 9.0
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Sex:
|
Not Specified
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Type:
|
section
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Note:
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14 somites.
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Specimen
2A:
embryonic day 9.0
(more )
Note: 20 somites. dorsal view
Specimen
2A:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Note:
|
20 somites. dorsal view
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Specimen
2B:
embryonic day 9.0
(more )
Note: 20 somites. lateral view
Specimen
2B:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Note:
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20 somites. lateral view
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Specimen
2C:
embryonic day 10.25
(more )
Specimen
2C:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 10.25
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Sex:
|
Not Specified
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Type:
|
whole mount
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: otocyst |
Weak |
Regionally restricted |
2C
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Expression is localized to the rostroventrolateral portion of the otocyst.
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TS17: ear |
Weak |
Regionally restricted |
2C
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There is weak expression in the otic epithelium.
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TS17: 1st branchial pouch endoderm |
Present |
Regionally restricted |
2C
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Expression is present in the endoderm lining the ends of the pharyngeal pouches.
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TS17: 2nd branchial pouch endoderm |
Present |
Regionally restricted |
2C
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Expression is present in the endoderm lining the ends of the pharyngeal pouches.
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TS17: 3rd branchial pouch endoderm |
Present |
Regionally restricted |
2C
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Expression is present in the endoderm lining the ends of the pharyngeal pouches.
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Specimen
not shown:
embryonic day 9.5
(more )
Note: 16-25 somites.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
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Type:
|
Not Specified
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Note:
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16-25 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: otic pit |
Absent |
|
|
Authors ststes expression detected in otic placode.
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TS15: otocyst |
Absent |
|
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Authors ststes expression detected in otic placode.
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Specimen
2D:
embryonic day 10.0
(more )
Specimen
2D:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
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Type:
|
section
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Specimen
not shown:
embryonic day 9.5
(more )
Note: 25-30 somites.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Age:
|
embryonic day 9.5
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Sex:
|
Not Specified
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Type:
|
Not Specified
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Note:
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25-30 somites.
|
Specimen
not shown:
embryonic day 10.5
(more )
Note: 35 somites.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Note:
|
35 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: otocyst |
Weak |
Regionally restricted |
|
Expression in the otic epithelium is significantly reduced, but not entirely lost.
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Specimen
not shown:
embryonic day 8.0; Mafbkr/Mafb +
(more )
Note: 1-6 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Mutant Allele(s):
|
Mafbkr/Mafb+
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Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
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Type:
|
Not Specified
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Note:
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1-6 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: future hindbrain |
Present |
Uniform |
|
Expression in this mutant is the same as in wild-type embryos.
|
Specimen
not shown:
embryonic day 8.0; Mafbkr/Mafb +
(more )
Note: 5 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
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Mutant Allele(s):
|
Mafbkr/Mafb+
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Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
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Type:
|
Not Specified
|
Note:
|
5 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: embryo ectoderm |
Present |
Regionally restricted |
|
Expression in this mutant is the same as in wild-type embryos.
|
Specimen
3A:
embryonic day 8.5; Mafbkr/Mafb +
(more )
Note: 7-11 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology. It is assumed from the expression pattern that this embryo was a heterozygote.
Specimen
3A:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafb+
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
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Type:
|
whole mount
|
Note:
|
7-11 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology. It is assumed from the expression pattern that this embryo was a heterozygote.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
3A
|
Expression in this mutant is the same as in wild-type embryos.
|
TS13: branchial arch |
Present |
Regionally restricted |
3A
|
Expressed is present in the endoderm lining the ends of the pharyngeal pouches.
|
Specimen
3B:
embryonic day 8.5; Mafbkr/ Mafbkr
(more )
Note: 7-11 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology. It is assumed from the expression pattern that this embryo was a homozygote.
Specimen
3B:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
7-11 somites. At the earliest stages examined it is impossible to distinguish between homozygous and heterozygous embryos on the basis of their morphology. It is assumed from the expression pattern that this embryo was a homozygote.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
3B
|
This embryo failed to show the intense expression in the caudal hindbrain, but retained the more diffuse expression in the rostral hindbrain as well as the ectodermal domain of expression in the prospective otic region.
|
TS13: otic placode |
Present |
Regionally restricted |
3B
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This embryo failed to show the intense expression in the caudal hindbrain, but retained the more diffuse expression in the rostral hindbrain as well as the ectodermal domain of expression in the prospective otic region.
|
TS13: branchial arch |
Present |
Regionally restricted |
3B
|
Expression in this mutant is the same as in wild-type embryos.
|
Specimen
3C:
embryonic day 9.0; Mafbkr/Mafb +
(more )
Note: 20 somites.
Specimen
3C:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafb+
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
20 somites.
|
Specimen
3D:
embryonic day 9.0; Mafbkr/ Mafbkr
(more )
Note: 20 somites.
Specimen
3D:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
20 somites.
|
Specimen
4A:
embryonic day 10.0; Mafbkr/Mafb +
(more )
Note: 25 somites.
Specimen
4A:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafb+
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
25 somites.
|
Specimen
4B:
embryonic day 10.0; Mafbkr/ Mafbkr
(more )
Note: 25 somites.
Specimen
4B:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Note:
|
25 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: otocyst epithelium |
Present |
Regionally restricted |
4B
|
In the mutants there is expression in the otic epithelium at this stage, but the domain is misplaced: instead of lying as usual in the anteroventrolateral wall of the otocyst, it lies in the ventromedial wall.
|
TS15: facio-acoustic preganglion complex |
Absent |
|
4B
|
No expression could be seen in the vestibuloacoustic ganglion.
|
Specimen
4C:
embryonic day 10.0; Mafbkr/Mafb +
(more )
Note: 25 somites. Embryo was embedded in gelatine-albumin after in situ hybridization and sectioned with a vibratome at a thickness of 50 um.
Specimen
4C:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafb+
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Embedding:
|
Gelatin
|
Note:
|
25 somites. Embryo was embedded in gelatine-albumin after in situ hybridization and sectioned with a vibratome at a thickness of 50 um.
|
Specimen
4D:
embryonic day 10.0; Mafbkr/ Mafbkr
(more )
Note: 25 somites. Embryo was embedded in gelatine-albumin after in situ hybridization and sectioned with a vibratome at a thickness of 50 um.
Specimen
4D:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Embedding:
|
Gelatin
|
Note:
|
25 somites. Embryo was embedded in gelatine-albumin after in situ hybridization and sectioned with a vibratome at a thickness of 50 um.
|
Specimen
not shown:
embryonic day 8.5; Mafbkr/ Mafbkr
(more )
Note: 10 somites.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Note:
|
10 somites.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: branchial arch |
Present |
Regionally restricted |
|
Expression in this mutant is the same as in wild-type embryos even though in the mutants the hindbrain domain is absent.
|
Specimen
not shown:
embryonic day 9.0; Mafbkr/ Mafbkr
(more )
Note: 20 somites.
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Note:
|
20 somites.
|
Specimen
not shown:
embryonic day 10.25; Mafbkr/ Mafbkr
(more )
Specimen
not shown:
(close )
Genetic Background:
|
involves: C3H/He * CBA
|
Mutant Allele(s):
|
Mafbkr/Mafbkr
|
Age:
|
embryonic day 10.25
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
|