Gene Expression Data
Assay Details
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Assay
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Reference:
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J:54638
Henderson DJ, et al., Rib truncations and fusions in the Sp2H mouse reveal a role for Pax3 in specification of the ventro-lateral and posterior parts of the somite. Dev Biol. 1999 May 1;209(1):143-58
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1346750
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Gene symbol:
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Pax1
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Gene name:
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paired box 1
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Probe:
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Pax1 probe5
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Beta-galactosidase
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Results
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Specimen
5.F wt:
embryonic day 11.5
(more  )
Specimen
5.F wt:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: embryo |
Present |
Regionally restricted |
5F left
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Expression is detected along the flank.
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Specimen
5.F Sp2H:
(close )
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Genetic Background:
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involves: C57BL/6
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Mutant Allele(s):
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Pax3Sp-2H/Pax3Sp-2H
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: embryo |
Present |
Regionally restricted |
5F right
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Expression is detected along the flank.
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Specimen
5.G:
embryonic day 11.5
(more )
Note: After whole-mount in situ hybridizations, embryos were sectioned in 0.45% gelatine, 27% albumin, 18% glucose in PBS which was solidified by the addition of 1/10 volume of 30% glutaraldehyde.
Specimen
5.G:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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Note:
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After whole-mount in situ hybridizations, embryos were sectioned in 0.45% gelatine, 27% albumin, 18% glucose in PBS which was solidified by the addition of 1/10 volume of 30% glutaraldehyde.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: trunk sclerotome |
Present |
Regionally restricted |
5G
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Expression is detected in the medial sclerotome, surrounding the notochord, in a distribution that does not overlap with tenascin-C.
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Specimen
5.H:
embryonic day 11.5; Pax3Sp-2H/ Pax3Sp-2H
(more )
Note: After whole-mount in situ hybridizations, embryos were sectioned in 0.45% gelatine, 27% albumin, 18% glucose in PBS which was solidified by the addition of 1/10 volume of 30% glutaraldehyde.
Specimen
5.H:
(close )
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Genetic Background:
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involves: C57BL/6
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Mutant Allele(s):
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Pax3Sp-2H/Pax3Sp-2H
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Age:
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embryonic day 11.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Gelatin
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Note:
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After whole-mount in situ hybridizations, embryos were sectioned in 0.45% gelatine, 27% albumin, 18% glucose in PBS which was solidified by the addition of 1/10 volume of 30% glutaraldehyde.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS19: trunk sclerotome |
Present |
Regionally restricted |
5H
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Expression is detected in the medial sclerotome, surrounding the notochord, in a distribution that does not overlap with tenascin-C. Expression is similar to that seen in the wild-type.
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Analysis Tools