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Gene Expression Data
Assay Details
Assay
Reference: J:95329 Perala NM, et al., The expression of plexins during mouse embryogenesis. Gene Expr Patterns. 2005 Feb;5(3):355-62
Assay type: RNA in situ
MGI Accession ID: MGI:3531099
Gene symbol: Plxnb1
Gene name: plexin B1
Probe: Plxnb1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Assay notes: The authors state that identical patterns were observed with the following probe: Plxnb1 cDNA2 (MGI:3531011).
Results
Specimen Table 1: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex mantle layer Strong
TS22: cerebral cortex ventricular layer Strong
TS22: intestine Strong
TS22: lung epithelium Strong
TS22: metanephros Strong
TS22: midbrain Strong
TS22: olfactory epithelium Strong
TS22: olfactory lobe Strong
TS22: oral epithelium Strong
TS22: retina Strong
TS22: tooth Strong
TS22: diencephalon Strong Regionally restricted Expression is in the optic recess of the diencephalon.
TS22: cerebral cortex marginal layer Moderate
TS22: choroid plexus Moderate
TS22: corpus striatum Moderate
TS22: dorsal root ganglion Moderate
TS22: remnant of Rathke's pouch Moderate
TS22: trigeminal ganglion Moderate
TS22: epidermis Weak
TS22: lung mesenchyme Weak
TS22: spinal cord Weak
TS22: cochlea Absent
TS22: endocardial tissue Absent
TS22: pre-cartilage condensation Absent
TS22: skeletal muscle Absent

Specimen 1: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: lung epithelium Strong 1_Plxnb1
TS22: metanephros Strong 1_Plxnb1
TS22: olfactory epithelium Strong 1_Plxnb1
TS22: oral epithelium Strong 1_Plxnb1
TS22: tooth Strong 1_Plxnb1
TS22: enteric nervous system Strong Regionally restricted 1_Plxnb1 Expression is in the lamina propria, muscularis externa and the enteric nervous plexus.
TS22: intestine Strong Regionally restricted 1_Plxnb1 Expression is in the lamina propria, muscularis externa and the enteric nervous plexus.
TS22: lens anterior epithelium Present 1_Plxnb1
TS22: neural retinal epithelium Present 1_Plxnb1
TS22: olfactory lobe Present 1_Plxnb1
TS22: optic stalk Present 1_Plxnb1
TS22: remnant of Rathke's pouch Present 1_Plxnb1
TS22: diencephalon Present Regionally restricted 1_Plxnb1 Expression is in the optic recess of the diencephalon.
TS22: epidermis Weak 1_Plxnb1
TS22: lung mesenchyme Weak 1_Plxnb1

Specimen 2A: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: maturing glomerular tuft Present Regionally restricted 2A Expression is in the podocytes.
TS22: renal cortex Present Regionally restricted 2A Expression is in undifferentiated mesenchyme.

Specimen 2B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: maturing glomerular tuft Present Regionally restricted 2B Expression is in the podocytes.
TS22: renal cortex Present Regionally restricted 2B Expression is in undifferentiated mesenchyme.

Specimen 2E: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: renal cortex Present Regionally restricted 2E Expression is in undifferentiated mesenchyme.

Specimen 2F: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: renal cortex Present Regionally restricted 2F Expression is in undifferentiated mesenchyme.

Specimen 2I: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: renal cortex Present Regionally restricted 2I Expression is in the very outermost cortex where immature glomeruli and mesenchyme are still present.

Specimen 2J: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: renal cortex Present Regionally restricted 2J Expression is in the very outermost cortex where immature glomeruli and mesenchyme are still present.

Specimen 3B: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: enamel knot Present 3B
TS22: oral epithelium Present 3B
TS22: inner enamel epithelium Present Regionally restricted 3B Expression is in the basal layer.
TS22: outer enamel epithelium Present Regionally restricted 3B Expression is in the basal layer.

Specimen 3E: embryonic day 15.0 (more )
Structure Level Pattern Image Note
TS23: enamel knot Present 3E
TS23: oral epithelium Present 3E
TS23: inner enamel epithelium Present Regionally restricted 3E Expression is in the basal layer.
TS23: outer enamel epithelium Present Regionally restricted 3E Expression is in the basal layer.

Specimen 3H: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: enamel knot Present 3H
TS24: oral epithelium Present 3H
TS24: inner enamel epithelium Present Regionally restricted 3H Expression is in the basal layer.
TS24: outer enamel epithelium Present Regionally restricted 3H Expression is in the basal layer.

Specimen 4B: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: seminiferous cord Present 4B

Specimen 4E: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: testis Present Regionally restricted 4E Expression is in the seminiferous tubules.

Specimen Not Shown: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: seminiferous cord Present


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory