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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3586092
Gene symbol: Hmga1
Gene name: high mobility group AT-hook 1
Probe: UI-M-AJ0-aav-b-10-0-UI.s1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 4438 high mobility group AT-hook 1. After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: neural retinal epithelium Strong Regionally restricted Submitted Image - Hmgat1e12b , Submitted Image - Hmgat1e12 Expression was detected in a subset of cells in the outer neuroblastic layer.
Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Present Regionally restricted Submitted Image - Hmgat1e14 , S3_HMG AT-1 E14 Expression was detected in the outer neuroblastic layer but was strong in a subset of cells.
Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina nuclear layer Present Regionally restricted S3_HMG AT-1 E16 , Submitted Image - Hmgat1e16 Expression was detected in the outer neuroblastic layer but was higher in a subset of cells.
Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina outer nuclear layer Present S3_HMG AT-1 E18 , Submitted Image - Hmgat1e18 Expression was detected in the outer neuroblastic layer.
Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Present Regionally restricted Submitted Image - Hmgat1p0 , S3_HMG AT-1 P0 Expression was detected in the vitreal outer neuroblastic layer.
Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Present Regionally restricted Submitted Image - Hmgat1p2 , S3_HMG AT-1 P2 Expression was detected in the vitreal outer neuroblastic layer.
Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted S3_HMG AT-1 P4 Expression was detected in the vitreal outer neuroblastic layer.
Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina inner nuclear layer Weak S3_HMG AT-1 P6 , Submitted Image - Hmgat1p6 Expression was detected in the inner nuclear layer and tentatively in Muller glia.
Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina Absent Submitted Image - Hmgat1adult , S3_HMG AT-1 Adult
Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: central nervous system Absent
Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: lung Present
TS24: liver Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/03/2024
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