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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3586120
Gene symbol: Neurod1
Gene name: neurogenic differentiation 1
Probe: UI-M-AQ0-aaf-e-04-0-UI.s1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 4636 Neurod1 neurogenic differentiation 1. After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: neural retinal epithelium Present Regionally restricted Expression was detected in a small subset of cells in the outer neuroblastic layer.

Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Present Regionally restricted Expression was detected in a small subset of cells in the scleral outer neuroblastic layer.

Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina nuclear layer Present Regionally restricted S6_NeuroD E16 Expression was detected in a small subset of cells in the scleral outer neuroblastic layer.

Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina outer nuclear layer Present Regionally restricted S6_NeuroD E18 , Submitted Image - AF43e18.5c Expression was detected in a large subset of cells in the scleral outer neuroblastic layer.

Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Present Regionally restricted S6_NeuroD P0 Expression was detected in the scleral outer neuroblastic layer.

Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Present Regionally restricted S6_NeuroD P2 , Submitted Image - AF43p3.5 Expression was detected in the scleral outer neuroblastic layer.

Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted S6_NeuroD P4 Expression was detected in the scleral and vitreal outer neuroblastic layer. The expression level was higher in the vitreal outer neuroblastic layer.

Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present S6_NeuroD P6 , Submitted Image - AF43p6.5
TS28: retina inner nuclear layer Present Submitted Image - AF43p6.5 , S6_NeuroD P6

Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present S6_NeuroD P8 , Submitted Image - AF43p8.5
TS28: retina inner nuclear layer Present S6_NeuroD P8 , Submitted Image - AF43p8.5

Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted S6_NeuroD Adult Expression was detected in the inner segment.
TS28: retina layer Weak Regionally restricted S6_NeuroD Adult Expression was detected in bipolar cells.

Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: dentate gyrus Present

Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: forebrain Present Regionally restricted Expression was detected in hippocampus.
TS24: cerebellum Present Regionally restricted Expression was detected in cerebellum precursors.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory