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Gene Expression Data
Assay Details
Assay
Reference: J:43761 Stoykova A, et al., Pax6-dependent regulation of adhesive patterning, R-cadherin expression and boundary formation in developing forebrain. Development. 1997 Oct;124(19):3765-77
Assay type: RNA in situ
MGI Accession ID: MGI:3608676
Gene symbol: Pax6
Gene name: paired box 6
Probe: Pax6 probe
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 4A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Strong Regionally restricted 4A Expression was detected in the ventricular zone of the anterior rhinencephalon, the hippocampal region and in a differentiating field in the basal rhinencephalon.
TS20: cerebral cortex ventricular layer Strong Regionally restricted 4A Expression was detected in the ventricular zone of the corticostriatal border.
TS20: telencephalon Strong Regionally restricted 4A Expression was detected in the ventricular zone of the amygdala.

Specimen 4E: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present 4E

Specimen 4I: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex ventricular layer Present Regionally restricted 4I Expression was detected in the ventricular zone of the lateral cortex but ceased at the boundary of the cortex and lateral ganglionic eminence. Boundary does not coincide with the cortico-striatal sulcus but extends over lateromost field of the LGE VZ.

Specimen 4K: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cerebral cortex ventricular layer Present Regionally restricted 4K Expression was detected in the ventricular zone of the lateral cortex but ceased at the boundary of the cortex and lateral ganglionic eminence. Boundary does not coincide with the cortico-striatal sulcus but extends over lateromost field of the LGE VZ.
TS20: forebrain Present Regionally restricted 4K Expression was detected in the posterior preoptic area but not in the anterior preoptic area. Expression in the posterior preoptic area did not include the mantle zone.

Specimen 4M: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: cerebral cortex Present 4M

Specimen 4O: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: cerebral cortex Present 4O

Specimen 5A: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex subventricular zone Present 5A
TS22: cerebral cortex ventricular layer Present 5A
TS22: forebrain Present Regionally restricted 5A Expression was detected in a differentiating field in the presumable region of the olfactory bulb in the anterior rhinencephalon.

Specimen 5F: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present 5F

Specimen 6A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 6A Expression was detected in ventral thalamus.
TS20: forebrain Present Regionally restricted 6A Expression was detected in the optoeminential zone including the eminentia thalami, supraoptic paraventricular area, anterior hypothalamus and posterior optic area.
TS20: diencephalon Present Regionally restricted 6A Expression was detected in the posterior region of the pretectum and the posterior commissure.

Specimen 6C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: thalamus Present Regionally restricted 6C Expression was detected in the ventral thalamus.
TS22: forebrain Present Regionally restricted 6C Expression was detected in the optoeminential zone including the eminentia thalami, supraoptic paraventricular area, anterior hypothalamus and posterior optic area.

Specimen 6E: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 6E Expression was detected in the ventral thalamus as in wild-type.

Specimen 7A: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex subventricular zone Present 7C , 7A
TS26: cerebral cortex ventricular zone Present 7C , 7A
TS26: telencephalon Present Regionally restricted 7A Expression was detected in the piriform cortex and the endopiriform nucleus.

Specimen 7F: embryonic day 18.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 7H , 7F

Specimen 8A: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: main olfactory bulb Present Regionally restricted 8A Expression was detected in the ventricular and subventricular zones, the presumptive internal granular layer and the periglomerular cell layer.
TS26: cerebral cortex subventricular zone Present 8A
TS26: cerebral cortex ventricular zone Present 8A

Specimen 8C: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: cerebral cortex subventricular zone Present 8C , 8F
TS26: cerebral cortex ventricular zone Present 8C , 8F

Specimen 8J: embryonic day 18.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS26: cerebral cortex Present 8J


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory