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Gene Expression Data
Assay Details
Assay
Reference: J:127119 Visel A, et al., Regulatory pathway analysis by high-throughput in situ hybridization. PLoS Genet. 2007 Oct 19;3(10):1867-83
Assay type: RNA in situ
MGI Accession ID: MGI:3766609
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Probe: MH768 probe 669
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 5 Rora: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: tongue Weak Regionally restricted 5_Rora
TS22: face Weak Regionally restricted 5_Rora Expression was weak in Face/Soft Tissues.
TS22: tail Weak Regionally restricted 5_Rora
TS22: forelimb Weak Regionally restricted 5_Rora
TS22: hindlimb Weak Regionally restricted 5_Rora
TS22: genital tubercle Weak Regionally restricted 5_Rora
TS22: skin Weak Regionally restricted 5_Rora
TS22: lung Weak Regionally restricted 5_Rora
TS22: metanephros Weak Regionally restricted 5_Rora
TS22: salivary gland Weak Regionally restricted 5_Rora
TS22: tooth Weak Regionally restricted 5_Rora
TS22: vibrissa follicle Weak Regionally restricted 5_Rora
TS22: esophagus Weak Regionally restricted 5_Rora
TS22: stomach Absent 5_Rora
TS22: intestine Absent 5_Rora
TS22: cochlea Absent 5_Rora
TS22: inner ear labyrinth Absent 5_Rora
TS22: olfactory epithelium Absent 5_Rora
TS22: retina Weak Regionally restricted 5_Rora
TS22: basal forebrain Absent 5_Rora
TS22: piriform cortex Absent 5_Rora
TS22: amygdala Absent 5_Rora
TS22: pretectum Absent 5_Rora
TS22: dorsal root ganglion Absent 5_Rora
TS22: cranial ganglion Absent 5_Rora
TS22: corpus striatum Absent 5_Rora
TS22: pallidum Absent 5_Rora
TS22: midbrain tegmentum Absent 5_Rora
TS22: spinal cord Weak Regionally restricted 5_Rora
TS22: pons Weak Regionally restricted 5_Rora
TS22: medulla oblongata Weak Regionally restricted 5_Rora
TS22: telencephalon septum Weak Regionally restricted 5_Rora
TS22: thalamus Strong Regionally restricted 5_Rora
TS22: hypothalamus Present Regionally restricted 5_Rora
TS22: cerebellum Strong Regionally restricted 5_Rora
TS22: superior colliculus Absent 5_Rora
TS22: inferior colliculus Absent 5_Rora
TS22: main olfactory bulb Absent 5_Rora
TS22: neocortex Absent 5_Rora
TS22: hippocampus Absent 5_Rora
TS22: ureter Absent 5_Rora
TS22: bladder Absent 5_Rora
TS22: urethra Absent 5_Rora
TS22: main bronchus Absent 5_Rora
TS22: trachea Weak Regionally restricted 5_Rora
TS22: palatal shelf Weak Regionally restricted 5_Rora
TS22: middle ear Absent 5_Rora
TS22: pharynx Absent 5_Rora
TS22: larynx Absent 5_Rora
TS22: optic nerve Absent 5_Rora
TS22: liver Absent 5_Rora
TS22: thymus primordium Weak Regionally restricted 5_Rora
TS22: thyroid gland Absent 5_Rora
TS22: pituitary gland Absent 5_Rora
TS22: pancreas Absent 5_Rora
TS22: spleen primordium Absent 5_Rora Expression was absent in Spleen.
TS22: adrenal gland Absent 5_Rora
TS22: gonad Absent 5_Rora
TS22: musculature Absent 5_Rora Expression was absent in Muscle System.
TS22: choroid plexus Absent 5_Rora
TS22: meninges Absent 5_Rora
TS22: blood vessel Absent 5_Rora
TS22: heart atrium Absent 5_Rora
TS22: heart ventricle Absent 5_Rora
TS22: appendicular skeleton Present Regionally restricted 5_Rora
TS22: axial skeleton Weak Regionally restricted 5_Rora
TS22: cranium Weak Regionally restricted 5_Rora
TS22: facial bone primordium Present Regionally restricted 5_Rora
TS22: lens Absent 5_Rora
TS22: cornea Absent 5_Rora
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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11/19/2024
MGI 6.24 		The Jackson Laboratory