About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:157819 Shimogori T, et al., A genomic atlas of mouse hypothalamic development. Nat Neurosci. 2010;13(6):767-75
Assay type: RNA in situ
MGI Accession ID: MGI:4452073
Gene symbol: Lhx9
Gene name: LIM homeobox protein 9
Probe: UI-M-CG0p-beo-c-08-0-UI.s1
Probe preparation: Antisense labelled with fluorescein RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3f: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Nkx2-1 (assay MGI:4450737).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 3g , 3f Expression is present in a region ventral to the intrahypothalamic diagonal.
Specimen 3h: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Arx (assay MGI:4450750).
Structure Level Pattern Image Note
TS20: thalamus Present Regionally restricted 3h Expression is present in the prethalamus.
TS20: hypothalamus Present Regionally restricted 3h Expression is present in a region ventral to the intrahypothalamic diagonal.
Specimen 5a: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx6 (assay MGI:4450765).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5a Expression is present in the intrahypothalamic diagonal.
Specimen 5b: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx6 (assay MGI:4450765).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5b Expression is present in the intrahypothalamic diagonal.
Specimen 5g: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx8 (assay MGI:4450748).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5g Expression is present in the intrahypothalamic diagonal.
Specimen 5h: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx8 (assay MGI:4450748).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5h Expression is present in the intrahypothalamic diagonal.
Specimen 5k: embryonic day 12.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx1 (assay MGI:4450905).
Structure Level Pattern Image Note
TS20: hypothalamus Present Regionally restricted 5k Expression is present in the intrahypothalamic diagonal.
Specimen 5l: embryonic day 16.5 (more )
Note: Double labeled: brown - Lhx9; blue - Lhx1 (assay MGI:4450905).
Structure Level Pattern Image Note
TS24: hypothalamus Present Regionally restricted 5l Expression is present in the intrahypothalamic diagonal.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory