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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823551
Gene symbol: C230086J09Rik
Gene name: RIKEN cDNA C230086J09 gene
Probe: T40472
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015784_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_01
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_01
Specimen euxassay_015784_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_015784_02
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_02
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_02
Specimen euxassay_015784_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_015784_03
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_03
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_03
Specimen euxassay_015784_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_04
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_04
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_04
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_04
Specimen euxassay_015784_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_05
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_05
Specimen euxassay_015784_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_06
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_06
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_06
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_06
Specimen euxassay_015784_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_07
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_07
Specimen euxassay_015784_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_08
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_08
Specimen euxassay_015784_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_015784_09
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015784_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_09
Specimen euxassay_015784_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_10
TS23: ventral grey horn Weak Regionally restricted euxassay_015784_10
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015784_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_015784_10
Specimen euxassay_015784_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_11
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_015784_11
Specimen euxassay_015784_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_12
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_12
Specimen euxassay_015784_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_13
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_13
Specimen euxassay_015784_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_015784_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_14
Specimen euxassay_015784_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_15
Specimen euxassay_015784_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_015784_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_015784_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015784_16
Specimen euxassay_015784_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_015784_17
Specimen euxassay_015784_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_015784_18
Specimen euxassay_015784_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_20
Specimen euxassay_015784_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_21
Specimen euxassay_015784_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_015784_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory