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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826716
Gene symbol: Nipal3
Gene name: NIPA-like domain containing 3
Probe: MGC clone 65447
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001516_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Weak Regionally restricted euxassay_001516_01
TS23: brain Weak Regionally restricted euxassay_001516_01

Specimen euxassay_001516_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_02
TS23: liver lobe Weak Regionally restricted euxassay_001516_02
TS23: stomach Weak Regionally restricted euxassay_001516_02
TS23: brain Weak Regionally restricted euxassay_001516_02

Specimen euxassay_001516_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_03
TS23: liver lobe Weak Regionally restricted euxassay_001516_03
TS23: stomach Weak Regionally restricted euxassay_001516_03
TS23: brain Weak Regionally restricted euxassay_001516_03

Specimen euxassay_001516_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_04
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001516_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_04
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_04
TS23: liver lobe Weak Regionally restricted euxassay_001516_04
TS23: stomach Weak Regionally restricted euxassay_001516_04
TS23: brain Weak Regionally restricted euxassay_001516_04

Specimen euxassay_001516_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_05
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001516_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_05
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_05
TS23: liver lobe Weak Regionally restricted euxassay_001516_05
TS23: stomach Weak Regionally restricted euxassay_001516_05
TS23: renal calyx Weak Regionally restricted euxassay_001516_05
TS23: brain Weak Regionally restricted euxassay_001516_05
TS23: spinal cord Weak Regionally restricted euxassay_001516_05

Specimen euxassay_001516_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_06
TS23: vagus ganglion Moderate Regionally restricted euxassay_001516_06
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_06
TS23: liver lobe Weak Regionally restricted euxassay_001516_06
TS23: stomach Weak Regionally restricted euxassay_001516_06
TS23: renal calyx Weak Regionally restricted euxassay_001516_06
TS23: spinal cord Weak Regionally restricted euxassay_001516_06
TS23: brain Weak Regionally restricted euxassay_001516_06

Specimen euxassay_001516_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_001516_07
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_07
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_001516_07
TS23: cervical ganglion Weak Regionally restricted euxassay_001516_07
TS23: liver lobe Weak Regionally restricted euxassay_001516_07
TS23: stomach Weak Regionally restricted euxassay_001516_07
TS23: renal pelvis Weak Regionally restricted euxassay_001516_07
TS23: spinal cord Weak Regionally restricted euxassay_001516_07
TS23: brain Weak Regionally restricted euxassay_001516_07

Specimen euxassay_001516_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_08
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_08
TS23: liver lobe Weak Regionally restricted euxassay_001516_08
TS23: stomach Weak Regionally restricted euxassay_001516_08
TS23: renal calyx Weak Regionally restricted euxassay_001516_08

Specimen euxassay_001516_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_09
TS23: liver lobe Weak Regionally restricted euxassay_001516_09
TS23: stomach Weak Regionally restricted euxassay_001516_09
TS23: brain Weak Regionally restricted euxassay_001516_09
TS23: spinal cord Weak Regionally restricted euxassay_001516_09

Specimen euxassay_001516_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_10
TS23: thoracic ganglion Weak Regionally restricted euxassay_001516_10
TS23: esophagus Weak Regionally restricted euxassay_001516_10
TS23: nucleus pulposus Moderate Regionally restricted euxassay_001516_10
TS23: oral epithelium Moderate Regionally restricted euxassay_001516_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_10
TS23: liver lobe Weak Regionally restricted euxassay_001516_10
TS23: midgut Weak Regionally restricted euxassay_001516_10
TS23: spinal cord Weak Regionally restricted euxassay_001516_10
TS23: brain Weak Regionally restricted euxassay_001516_10

Specimen euxassay_001516_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_11
TS23: esophagus Weak Regionally restricted euxassay_001516_11
TS23: nucleus pulposus Moderate Regionally restricted euxassay_001516_11
TS23: oral epithelium Moderate Regionally restricted euxassay_001516_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_11
TS23: liver lobe Weak Regionally restricted euxassay_001516_11
TS23: midgut Weak Regionally restricted euxassay_001516_11
TS23: foregut-midgut junction Weak Regionally restricted euxassay_001516_11
TS23: hindgut Weak Regionally restricted euxassay_001516_11
TS23: brain Weak Regionally restricted euxassay_001516_11
TS23: spinal cord Weak Regionally restricted euxassay_001516_11

Specimen euxassay_001516_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_12
TS23: oral epithelium Moderate Regionally restricted euxassay_001516_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_12
TS23: bladder Moderate Regionally restricted euxassay_001516_12
TS23: liver lobe Weak Regionally restricted euxassay_001516_12
TS23: midgut Weak Regionally restricted euxassay_001516_12
TS23: hindgut Weak Regionally restricted euxassay_001516_12
TS23: foregut-midgut junction Weak Regionally restricted euxassay_001516_12

Specimen euxassay_001516_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_001516_13
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_13
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_001516_13
TS23: oral epithelium Moderate Regionally restricted euxassay_001516_13
TS23: bladder Moderate Regionally restricted euxassay_001516_13
TS23: rectum lumen Moderate Regionally restricted euxassay_001516_13
TS23: liver lobe Weak Regionally restricted euxassay_001516_13
TS23: foregut-midgut junction Weak Regionally restricted euxassay_001516_13
TS23: hindgut Weak Regionally restricted euxassay_001516_13
TS23: midgut Weak Regionally restricted euxassay_001516_13
TS23: brain Weak Regionally restricted euxassay_001516_13
TS23: spinal cord Weak Regionally restricted euxassay_001516_13

Specimen euxassay_001516_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_14
TS23: vagus ganglion Moderate Regionally restricted euxassay_001516_14
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_14
TS23: oral epithelium Moderate Regionally restricted euxassay_001516_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_14
TS23: rectum lumen Moderate Regionally restricted euxassay_001516_14
TS23: liver lobe Weak Regionally restricted euxassay_001516_14
TS23: foregut-midgut junction Weak Regionally restricted euxassay_001516_14
TS23: midgut Weak Regionally restricted euxassay_001516_14
TS23: hindgut Weak Regionally restricted euxassay_001516_14
TS23: brain Weak Regionally restricted euxassay_001516_14

Specimen euxassay_001516_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_001516_15
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_15
TS23: vagus ganglion Moderate Regionally restricted euxassay_001516_15
TS23: tail dorsal root ganglion Moderate Regionally restricted euxassay_001516_15
TS23: oral epithelium Moderate Regionally restricted euxassay_001516_15
TS23: nasal cavity epithelium Weak Regionally restricted euxassay_001516_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_001516_15
TS23: liver lobe Weak Regionally restricted euxassay_001516_15
TS23: midgut Weak Regionally restricted euxassay_001516_15
TS23: hindgut Weak Regionally restricted euxassay_001516_15
TS23: brain Weak Regionally restricted euxassay_001516_15

Specimen euxassay_001516_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_001516_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001516_16
TS23: liver lobe Weak Regionally restricted euxassay_001516_16
TS23: brain Weak Regionally restricted euxassay_001516_16

Specimen euxassay_001516_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Weak Regionally restricted euxassay_001516_17
TS23: brain Weak Regionally restricted euxassay_001516_17

Specimen euxassay_001516_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Weak Regionally restricted euxassay_001516_18
TS23: brain Weak Regionally restricted euxassay_001516_18

Specimen euxassay_001516_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Weak Regionally restricted euxassay_001516_19
TS23: brain Weak Regionally restricted euxassay_001516_19


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/22/2024
MGI 6.24
The Jackson Laboratory