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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828245
Gene symbol: Slc4a4
Gene name: solute carrier family 4 (anion exchanger), member 4
Probe: T56002
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen S4: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain ventricular layer Strong Regionally restricted S4H E14.5 Expression is present in the ependymal cells lining the ventricular floor from the midbrain to the spinal cord.
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: midbrain Strong
TS23: pons Strong
TS23: medulla oblongata Strong
Specimen euxassay_019682_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019682_06
Specimen euxassay_019682_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019682_07
Specimen euxassay_019682_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Weak Regionally restricted euxassay_019682_08
Specimen euxassay_019682_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Weak Regionally restricted euxassay_019682_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019682_09
Specimen euxassay_019682_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019682_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019682_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_019682_10
Specimen euxassay_019682_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019682_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019682_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_019682_11
Specimen euxassay_019682_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain floor plate Moderate Regionally restricted euxassay_019682_12
TS23: medulla oblongata floor plate Moderate Regionally restricted euxassay_019682_12
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_019682_12
Specimen euxassay_019682_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord floor plate Strong Regionally restricted euxassay_019682_13
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_019682_13
TS23: diencephalon floor plate Moderate Regionally restricted euxassay_019682_13
Specimen euxassay_019682_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_019682_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019682_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019682_14
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_019682_14
Specimen euxassay_019682_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019682_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019682_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_019682_15
Specimen euxassay_019682_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019682_16
TS23: pons ventricular layer Weak Regionally restricted euxassay_019682_16
Specimen euxassay_019682_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Weak Regionally restricted euxassay_019682_17
Specimen euxassay_019682_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Weak Regionally restricted euxassay_019682_18
Specimen euxassay_019682_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Weak Regionally restricted euxassay_019682_19
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/09/2024
MGI 6.24 		The Jackson Laboratory