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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828349
Gene symbol: Snhg11
Gene name: small nucleolar RNA host gene 11
Probe: T40390
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014130_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_02
TS23: neural retina Strong Regionally restricted euxassay_014130_02
Specimen euxassay_014130_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_03
TS23: neural retina Strong Regionally restricted euxassay_014130_03
Specimen euxassay_014130_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_04
TS23: neural retina Strong Regionally restricted euxassay_014130_04
Specimen euxassay_014130_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_05
TS23: neural retina Strong Regionally restricted euxassay_014130_05
Specimen euxassay_014130_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_06
TS23: facial ganglion Strong Regionally restricted euxassay_014130_06
Specimen euxassay_014130_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_07
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_07
TS23: facial ganglion Strong Regionally restricted euxassay_014130_07
Specimen euxassay_014130_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_08
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_08
TS23: facial ganglion Strong Regionally restricted euxassay_014130_08
Specimen euxassay_014130_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_09
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_09
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_09
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014130_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_09
Specimen euxassay_014130_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_10
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_10
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_10
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_10
Specimen euxassay_014130_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_11
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_11
TS23: trigeminal nerve Strong Regionally restricted euxassay_014130_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_11
Specimen euxassay_014130_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_12
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_12
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_12
Specimen euxassay_014130_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_13
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_13
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_13
Specimen euxassay_014130_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_14
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_14
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_14
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_14
Specimen euxassay_014130_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_15
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_15
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_15
Specimen euxassay_014130_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_16
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_16
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_16
Specimen euxassay_014130_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_17
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_17
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_17
Specimen euxassay_014130_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_18
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_18
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_18
Specimen euxassay_014130_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_19
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_014130_19
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_19
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_19
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_19
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_19
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_014130_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_19
TS23: trigeminal nerve Strong Regionally restricted euxassay_014130_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_19
Specimen euxassay_014130_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_20
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_20
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_20
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_20
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_20
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_20
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_20
Specimen euxassay_014130_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_21
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_21
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_21
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_21
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_21
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_014130_21
TS23: vagus ganglion Strong Regionally restricted euxassay_014130_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014130_21
TS23: facial ganglion Strong Regionally restricted euxassay_014130_21
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_21
Specimen euxassay_014130_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_014130_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_22
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_22
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_22
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_22
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_22
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_22
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_014130_22
TS23: facial ganglion Strong Regionally restricted euxassay_014130_22
TS23: dorsal root ganglion Strong Regionally restricted euxassay_014130_22
Specimen euxassay_014130_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_23
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_23
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_23
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_23
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_014130_23
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_014130_23
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_23
TS23: facial ganglion Strong Regionally restricted euxassay_014130_23
Specimen euxassay_014130_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_014130_24
TS23: midbrain mantle layer Strong Regionally restricted euxassay_014130_24
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_014130_24
TS23: pons mantle layer Strong Regionally restricted euxassay_014130_24
TS23: trigeminal ganglion Strong Regionally restricted euxassay_014130_24
TS23: facial ganglion Strong Regionally restricted euxassay_014130_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory