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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4887355
Gene symbol: Foxa1
Gene name: forkhead box A1
Probe: MH864 probe 779
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen 7A: embryonic day 14.5 (more )
Note: This specimen is from euxassay_018252.
Structure Level Pattern Image Note
TS23: diencephalon lateral wall Present Regionally restricted 7D , 7A Expression is present in the basal plate of the neuroepithelium.
TS23: midbrain lateral wall Present Regionally restricted 7D , 7A Expression is present in the basal plate of the neuroepithelium.
TS23: hindbrain basal plate Present 7A , 7D Expression is present in the basal plate of the neuroepithelium.
TS23: hypothalamus Present Regionally restricted 7D , 7A Expression is present in the basal plate of the neuroepithelium of the caudal hypothalamus.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory