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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423246
Gene symbol: Ptgis
Gene name: prostaglandin I2 (prostacyclin) synthase
Probe: EG771 probe 770
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EG771; Specimen G0303: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_G0303_2_2D
TS22: central nervous system Strong Regionally restricted Embryo_G0303_2_2D
TS22: telencephalon Weak Regionally restricted Embryo_G0303_2_4A
TS22: cerebral cortex Weak Scattered Embryo_G0303_2_2C
TS22: neocortex Weak Scattered Embryo_G0303_2_4A
TS22: olfactory cortex Weak Regionally restricted Embryo_G0303_2_2C
TS22: main olfactory bulb Absent
TS22: piriform cortex Weak Scattered Embryo_G0303_2_2C
TS22: hippocampus Weak Scattered Embryo_G0303_2_3D
TS22: basal ganglia Weak Scattered Embryo_G0303_2_4A
TS22: corpus striatum Weak Scattered Embryo_G0303_2_3B Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Weak Scattered Embryo_G0303_2_4A
TS22: pallidum Weak Scattered Embryo_G0303_2_4A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Scattered Embryo_G0303_2_4A
TS22: thalamus Weak Scattered Embryo_G0303_2_4A
TS22: hypothalamus Weak Scattered Embryo_G0303_2_4A
TS22: midbrain Weak Scattered Embryo_G0303_2_3D
TS22: pretectum Weak Scattered Embryo_G0303_2_4A
TS22: superior colliculus Weak Scattered Embryo_G0303_2_3D
TS22: inferior colliculus Absent
TS22: midbrain tegmentum Absent
TS22: hindbrain Strong Regionally restricted Embryo_G0303_2_2D
TS22: cerebellum Absent
TS22: pons Absent
TS22: medulla oblongata Strong Regionally restricted Embryo_G0303_2_2D
TS22: spinal cord Moderate Regionally restricted Embryo_G0303_2_2D
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Absent
TS22: eye Absent
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Strong Regionally restricted Embryo_G0303_2_5A
TS22: inner ear Strong Regionally restricted Embryo_G0303_2_5A
TS22: cochlea Strong Regionally restricted Embryo_G0303_2_5A
TS22: inner ear labyrinth Strong Regionally restricted Embryo_G0303_2_5B
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_G0303_2_3D Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_G0303_2_4A
TS22: salivary gland Moderate Regionally restricted Embryo_G0303_2_2D
TS22: tongue Strong Regionally restricted Embryo_G0303_2_4A
TS22: tooth Strong Regionally restricted Embryo_G0303_2_3D
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Weak Regionally restricted Embryo_G0303_2_1C
TS22: liver Absent
TS22: respiratory system Absent
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Absent
TS22: urinary system Strong Regionally restricted Embryo_G0303_2_5A Expression was strong in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_G0303_2_2C
TS22: ureter Absent
TS22: bladder Moderate Regionally restricted Embryo_G0303_2_4A
TS22: urethra Absent
TS22: reproductive system Strong Regionally restricted Embryo_G0303_2_5A
TS22: genital tubercle Strong Regionally restricted Embryo_G0303_2_5A
TS22: gonad Moderate Regionally restricted Embryo_G0303_2_2A
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Strong Regionally restricted Embryo_G0303_2_3C
TS22: heart Strong Regionally restricted Embryo_G0303_2_3C
TS22: heart atrium Strong Regionally restricted Embryo_G0303_2_3C
TS22: heart ventricle Strong Regionally restricted Embryo_G0303_2_3B
TS22: blood vessel Strong Regionally restricted Embryo_G0303_2_3B
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Strong Ubiquitous Embryo_G0303_2_1A
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Moderate Regionally restricted Embryo_G0303_2_4A
TS22: cranium Strong Regionally restricted Embryo_G0303_2_4A Expression was strong in the skull (base and vault).
TS22: axial skeleton Strong Regionally restricted Embryo_G0303_2_1C
TS22: tail Strong Regionally restricted Embryo_G0303_2_5D
TS22: forelimb Strong Regionally restricted Embryo_G0303_2_1A
TS22: hindlimb Strong Regionally restricted Embryo_G0303_2_2B
TS22: integumental system Absent
TS22: skin Absent
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/22/2024
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